Table 1. Genes with different transcript levels in the Δhts10 deletion mutant and the parent strain H119, as revealed with DNA microarray analysis.
|
A |
| HVO number | gene name / function | no. of spots |
regulation level |
|---|---|---|---|
| HVO_0259 |
hypothetic protein |
1 |
55.28 |
| HVO_0255 - 0258 |
spermine/spermidine synthase family protein; conserved protein; XerC/D-like integrase |
1 |
16.61 |
| HVO_0160 |
CAAX N-terminal protease family, transmembrane |
1 |
14.27 |
| HVO_2079 |
conserved protein |
1 |
12.82 |
| HVO_0266 - 0271 |
all hypothetic proteins |
5 |
11.15 |
| HVO_B0128 |
glucose 1-dehydrogenase related protein |
1 |
5.26 |
| HVO_0260 - 0261 |
PhiH1 repressor-like; putative repressor phrH2 |
1 |
5.07 |
| HVO_2447 - 2448 |
probable integral membrane protein; transcription initiation factor TFB |
1 |
4.60 |
| HVO_0299 |
membrane protein, putative |
1 |
4.20 |
|
B |
| HVO number | gene name / function | no. of spots |
regulation level |
|---|---|---|---|
| HVO_2160 |
Muc19 precursor, putative |
3 |
0.44 |
| HVO_2401 | glycine cleavage system P-protein | 1 | 0.49 |
(A)
Genes upregulated in the Δhts10 deletion mutant and (B) genes downregulated in the Δhts10 deletion mutant. Column 1 (HVO number) shows the gene number (see www.halolex.mpg.de), column 2 (gene name/ function) lists the gene name and annotated function, column 3 (no. of spots) shows the number of times the gene is represented on the microarray and column 4 (regulation level (mean value)) lists the fold induction of repression. Average values of three independent biological replicates are shown, which included one dye swap.