Skip to main content

View full-text article in PMC

. 2012 May 25;9:100. doi: 10.1186/1743-422X-9-100

Table 1.

Primer sets used in study

Primer Name	Sequence 5′-3′	Genome position	Amplicon size bps	Reference	Where used in study
E1-primary-F	ACAAAACCGTCATCCCGTCTC	10145–11158	1013	[7]	Primary PCR
E1-primary-R	TGACTATGTGGTCCTTCGGAGG	10145–11158	1013	[7]	Primary PCR
E1-F1	GCTCCGCGTCCTTTACC	10389–10943	555	[8]	Nested PCR, Phylogenetic analysis
E1-R1	ATGGCGACGCCCCCAAAGTC	10389–10943	555	[8]	Nested PCR, Phylogenetic analysis
E1-gene-F	GCGTACGAACACGTAACA	9991–11310	1320	This study	Molecular signatures
E1-gene-R	GTGCCTGCTGAACGACAC	9991–11310	1320	This study	Molecular signatures
E2-gene-F	AGCACCAAGGACAACTTCAAT	8542–9807	1266	This study	Phylogenetic analysis Molecular signatures
E2-gene-R	TTTAGCTGTTCTGATGCAGC