Table 1.
Fitness of evolved viruses relative to the ancestral and predecessor strains, on the typical host P. phaseolicola , and the novel host P. pseudoalcaligenes ERA
| Clone | Fitness on PP1 | Relative to A12 | Relative to predecessor3 | Fitness on ERA1 | Relative to B14 | Relative to predecessor3 |
|---|---|---|---|---|---|---|
| A1 (anc) |
0.298 (0.062) |
n.a. |
n.a. |
--- |
n.a. |
n.a. |
| B1 |
0.180 (0.226) |
|
|
−1.373 (0.262) |
n.a. |
n.a. |
| C1 |
−0.630 (0.219) |
↓ |
↓ |
−0.437 (0.221) |
↑ |
↑ |
| C2 |
0.121 (0.168) |
|
|
--- |
--- |
--- |
| D1 |
−0.875 (0.083) |
↓ |
|
−0.277 (0.159) |
↑ |
|
| D2 |
−0.697 (0.236) |
↓ |
|
−0.527 (0.316) |
↑ |
|
| D3 |
0.272 (0.167) |
|
|
--- |
--- |
--- |
| D4 |
0.327 (0.069) |
|
↑ |
--- |
--- |
--- |
| E1 |
−0.935 (0.140) |
↓ |
|
−0.432 (0.097) |
↑ |
|
| E2 |
−0.855 (0.123) |
↓ |
|
−0.256 (0.104) |
↑ |
|
| E3 |
−0.651 (0.199) |
↓ |
|
−0.395 (0.222) |
↑ |
|
| E4 |
−0.640 (0.170) |
↓ |
|
0.075 (0.275) |
↑ |
↑ |
| E5 |
−0.583 (0.185) |
↓ |
↓ |
--- |
--- |
--- |
| E6 |
0.287 (0.065) |
|
|
−0.379 (0.237) |
↑ |
--- |
| E7 |
−0.490 (0.122) |
↓ |
↓ |
--- |
--- |
--- |
| E8 |
0.362 (0.228) |
|
|
--- |
--- |
--- |
| F1 |
−0.480 (0.209) |
↓ |
↑ |
--- |
--- |
--- |
| F2 |
−0.219 (0.264) |
↓ |
↑ |
0.005 (0.265) |
↑ |
↑ |
| F3 |
−0.694 (0.167) |
↓ |
|
−0.264 (0.140) |
↑ |
|
| F4 |
0.142 (0.041) |
↑ |
↑ |
−0.242 (0.163) |
↑ |
|
| F5 |
−0.550 (0.278) |
↓ |
|
−0.045 (0.182) |
↑ |
↑ |
| F6 |
−0.401 (0.078) |
↓ |
↑ |
--- |
--- |
--- |
| F7 |
0.387 (0.108) |
|
↑ |
0.510 (0.242) |
↑ |
↑ |
| F8 |
0.101 (0.157) |
|
↑ |
0.698 (0.122) |
↑ |
↑ |
| F9 |
−0.058 (0.114) |
↓ |
↑ |
--- |
--- |
--- |
| F10 |
−0.066 (0.050) |
↓ |
↑ |
--- |
--- |
--- |
| F11 |
0.283 (0.181) |
|
|
−0.332 (0.258) |
↑ |
|
| F12 |
0.287 (0.101) |
|
|
−0.222 (0.185) |
↑ |
|
| F13 |
−0.048 (0.168) |
↓ |
↑ |
--- |
--- |
--- |
| F14 |
−0.845 (0.199) |
↓ |
↓ |
--- |
--- |
--- |
| F15 |
0.494 (0.178) |
|
|
1.028 (0.148) |
↑ |
--- |
| F16 | 0.445 (0.117) | --- | --- | --- |
1Values are means (std. dev.) of six log fitness estimates; ↑ and ↓ indicate significantly higher and lower fitness relative to ancestor or to immediate predecessor clone; open cells indicate no statistical difference; --- indicates test could not be performed.
2Tested relative to Bonferroni corrected probability of 0.0016.
3Tested relative to Bonferroni corrected probability of 0.025.
4Tested relative to Bonferroni corrected probability of 0.003.