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. 2012 Sep 12;28(22):2898–2904. doi: 10.1093/bioinformatics/bts553

Fig. 3.

Fig. 3.

Fisher’s exact test statistics. The observed Inline graphic values were calculated by using Fisher’s P-value to calculate quantiles of Inline graphic distribution. Expected values were random quantiles in Inline graphic distribution with df = 1. In this and subsequent quantile–quantile plots, the shaded region is the 95% concentration band. (a) 473 SNPs after initial filtering. (b) 431 SNPs after further filtering by chromosome coverage