Table 3. Comparison between van der Waals interactions of the different studied systems.
Residue | WT-T | WT-T | A156L-T | A156L-T |
Tyr117 | −2.21 | −2.52 | −2.08 | −1.24 |
Trp122 | −1.09 | −0.78 | −0.72 | −0.90 |
Phe133 | −5.13 | −3.15 | −5.32 | −5.12 |
Ser140 | −0.42 | −0.51 | −0.08 | −0.90 |
Ile154 | −0.65 | −0.51 | −0.57 | −0.66 |
Phe158 | −4.15 | −3.41 | −4.35 | −4.66 |
Trp163 | −1.28 | −1.30 | −1.41 | −1.28 |
Ile171 | −1.60 | −1.97 | −1.42 | −1.26 |
Ile179 | −4.87 | −4.41 | −4.34 | −4.90 |
Val182 | −3.49 | −1.72 | −3.77 | −3.57 |
Leu183 | −3.30 | −3.52 | −3.09 | −3.27 |
Phe187 | −2.08 | −1.26 | −2.16 | −1.98 |
Leu189 | −0.73 | −0.54 | −0.66 | −0.73 |
Ile194 | −1.21 | −1.52 | −1.31 | −1.20 |
Ile210 | −1.42 | −1.72 | −1.49 | −1.17 |
Phe203 | −1.36 | −1.37 | −1.13 | −1.45 |
Val206 | −0.76 | −0.93 | −1.01 | −0.48 |
Phe207 | −0.54 | −0.78 | −0.89 | −0.79 |
Ile210 | −1.42 | −1.72 | −1.49 | −1.17 |
Leu214 | −0.35 | −0.37 | −0.41 | −0.10 |
Leu218 | −0.03 | −0.08 | −0.02 | −0.01 |
Total | −38.09 | −34.09 | −37.72 | −38.76 |
The van der Waals interactions (in kcal mol) shown are between the tocopherol isoform and the binding pocket residues (upper part), and the most significant mobile gate residues (lower part).