Table 5.
Illumina genotype concordance
| Sample | Matched blood DNA | Matched saliva DNA | Matched blood/saliva DNA |
|---|---|---|---|
| 1 |
306,737/307,301 (99.8%) |
313,721/313,811 (100%) |
309,996/310,351 (99.9%) |
| 2 |
314,603/314,646 (100%) |
316,572/316,579 (100%) |
314,421/314,479 (100%) |
| 3 |
315,719/315,732 (100%) |
315,688/315,736 (100%) |
315,675/315,707 (100%) |
| 4 |
303,915/304,196 (99.9%) |
313,665/313,721 (100%) |
309,613/309773 (99.9%) |
| Overall | 99.9% | 100% | 100% |
The number of concordant results/the total number of SNPs with 2 genotype calls for the 4 samples tested on Illumina chips.