Table 4.

Table shows regions of the genome considered biased after whole genome amplification

Chromosome	Start Position	End Position	Number of Animals
1	9,948,603	10,128,760	137
1	18,418,830	18,641,391	115
2	4,278	9,124,477	163
2	1,632,514	3,559,307	106
2	73,598,562	106,082,295	125
4	120,957,396	128,105,906	129
7	48,160	11,045,685	135
7	58,390,175	64,149,907	135
9	27,950	7,940,294	118
11	52,003	6,263,717	141
11	60,971,377	68,843,993	179
14	137,688,899	148,678,088	185
16	46,422,064	58,631,201	165

SNP chip data were re-analysed and specific regions of the genome that consistently failed to amplify were noted. Consistent failure was considered to have occurred if there was no call for 100 animals or more.