Table 4.
Suggested predictions for experimental validation.
| Gene Symbol | Chr | Str | SNP(rs#) | Location | Posterior | SS | FDR | Group |
|---|---|---|---|---|---|---|---|---|
| CCDC148 |
chr2 |
+ |
17492855 |
158989711 |
0.999999314 |
18 |
0.014 |
II |
|
BAT1 |
chr6 |
- |
3093976 |
31610839 |
0.999930191 |
8 |
0.12 |
II |
| PEBP1 |
chr12 |
+ |
1051470 |
117067614 |
0.999873859 |
14 |
0.051 |
II |
|
LOC100130955 |
chr14 |
+ |
11160608 |
100382845 |
0.999795515 |
20 |
0.023 |
II |
| RPL10AP6 |
chr3 |
+ |
584959 |
61703763 |
0.999517203 |
11 |
0.055 |
II |
| KCNJ12 |
chr17 |
+ |
16962951 |
21259999 |
0.998953843 |
11 |
0.055 |
II |
| VARS2 |
chr6 |
+ |
1043483 |
31001706 |
0.998607936 |
14 |
0.051 |
II |
|
BAT2 |
chr6 |
- |
2272593 |
31709322 |
0.998223631 |
9 |
0.052 |
II |
| RPL10AP6 |
chr3 |
+ |
584959 |
61703763 |
0.995668725 |
9 |
0.052 |
I |
| KDM5B |
chr1 |
+ |
10800864 |
201003241 |
0.995398014 |
9 |
0.052 |
I |
|
TAPBP |
chr6 |
- |
1059288 |
33375649 |
0.995270134 |
13 |
0.057 |
II |
| KCNQ5 |
chr6 |
- |
2000203 |
73753786 |
0.993101795 |
13 |
0.069 |
II |
| FER |
chr5 |
+ |
2009646 |
108148856 |
0.989758091 |
6 |
0 |
I |
| LOC643534 |
chr5 |
+ |
2009646 |
108148856 |
0.989758091 |
6 |
0 |
I |
| LY6G5B |
chr6 |
- |
1266076 |
31748496 |
0.98719144 |
16 |
0.028 |
II |
| NOMO2 |
chr16 |
+ |
7179 |
14897344 |
0.979473344 |
7 |
0 |
II |
| BAT5 |
chr6 |
- |
1475865 |
31765391 |
0.979015507 |
7 |
0 |
II |
| RXRB |
chr6 |
- |
6531 |
33271428 |
0.977747582 |
6 |
0 |
II |
| FER |
chr5 |
+ |
2009646 |
108148856 |
0.962143895 |
6 |
0 |
II |
|
ZBTB22 |
Chr6 |
- |
1061783 |
33390605 |
0.96804794 |
12 |
0.076 |
II |
| LOC283398 |
chr12 |
- |
3827521 |
93467186 |
0.908227908 |
7 |
0 |
I |
| UCRC |
chr22 |
+ |
14115 |
28493525 |
0.889141351 |
15 |
0.039 |
II |
| MT2A |
chr16 |
+ |
10636 |
55200843 |
0.709333922 |
10 |
0.142 |
II |
| RQCD1 |
chr2 |
+ |
526897 |
219141840 |
0.683651187 |
13 |
0.128 |
II |
| PSMC3IP |
chr17 |
- |
6963 |
37985122 |
0.661403579 |
12 |
0.146 |
II |
|
CSTF3 |
chr11 |
- |
1028564 |
33118584 |
0.479199531 |
8 |
0.373 |
II |
|
LOC100128252 |
chr19 |
+ |
3971706 |
61697880 |
0.478128233 |
4 |
0.343 |
I |
|
LOC100130814 |
chr14 |
- |
2295655 |
100608883 |
0.446498085 |
18 |
0.228 |
II |
|
IMPDH1 |
chr7 |
- |
2228075 |
127821864 |
0.283348511 |
17 |
0.318 |
II |
| CLDN4 | chr7 | + | 1127155 | 72884396 | 0.270700082 | 4 | 0.594 | I |
Boldface indicates proximity to known imprinted genes. Underline indicates a gene has multiple (≥3) SNPs with posteriors > 0.2. Genes are sorted by their posteriors. RPL10AP6 and FER are listed for both Group I and Group II. Abbreviations are the same as in Table 2.