Table 5.
20 SNPs of which one specific allele had a higher transcript level than the other one among various tissues and individuals
| SNP | Chr | Position | Str | Ratio | P-value | Gene Symbol |
|---|---|---|---|---|---|---|
| rs13884 |
chr19 |
18545100 |
+ |
1/24 |
3.58E-05 |
UBA52 |
| rs4621 |
chr11 |
65380094 |
+ |
0/17 |
9.16E-05 |
CFL1 |
| rs425485 |
chr19 |
3004801 |
+ |
0/13 |
0.000976563 |
AES |
| rs4874 |
chr17 |
17227958 |
- |
0/12 |
0.001171875 |
LOC388344 |
| rs6565924 |
chr18 |
72820212 |
+ |
0/12 |
0.001171875 |
MBP |
| rs6554 |
chr19 |
18546963 |
+ |
0/11 |
0.001953125 |
UBA52 |
| rs11543289 |
chr17 |
34136120 |
+ |
0/10 |
0.003348214 |
MLLT6/LOC100129395 |
| rs17626 |
chr19 |
44618360 |
- |
1/13 |
0.005126953 |
RPS16 |
| rs8118 |
chr16 |
4787169 |
- |
0/9 |
0.005208333 |
ROGDI |
| rs9199 |
chr18 |
72821323 |
- |
0/8 |
0.009375 |
MBP |
| rs7612 |
chr7 |
5533637 |
+ |
1/11 |
0.01171875 |
ACTB |
| rs6597982 |
chr11 |
778006 |
- |
1/11 |
0.01171875 |
CEND1 |
| rs1803283 |
chr14 |
1.03E+08 |
- |
2/14 |
0.011944111 |
CKB |
| rs7982 |
chr8 |
27518397 |
- |
2/13 |
0.015854779 |
CLU |
| rs3743566 |
chr16 |
57103285 |
+ |
2/13 |
0.015854779 |
NDRG4 |
| rs2821 |
chr20 |
5853778 |
+ |
3/16 |
0.015854779 |
CHGB |
| rs7121 |
chr20 |
56912201 |
+ |
3/16 |
0.015854779 |
GNAS |
| rs12165042 |
chr17 |
30502328 |
+ |
4/18 |
0.020589193 |
UNC45B |
| rs1150 |
chr17 |
8003307 |
+ |
2/12 |
0.024362664 |
VAMP2 |
| rs10064485 | chr5 | 1.75E+08 | + | 2/11 | 0.039257813 | CPLX2 |