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. 2012 Dec;86(23):12891–12902. doi: 10.1128/JVI.01055-12

Table 1.

BAC recombineering, sequencing, and PCR oligonucleotides

Oligonucleotide name Sequence (5′ to 3′) Length (no. of bases)
gDgalKf CCCGGCAGCGTGCCTCACCTCGAAGGCCTACCAACAGGGCGTGACGGTCGCCTGTTGACAATTAATCATCGGCA 74
gDgalKr GGCGATTTTTAAGCTGTATAGGGCGACGGTGCGCTGGTTTTCGGGGATAATCAGCACTGTCCTGCTCCTT 70
D215G/R222N/F223If CCCGGCAGCGTGCCTCACCTCGAAGGCCTACCAACAGGGCGTGACGGTCGGCAGCATCGGGATGCTCCCCAACATTATCCCCGAAAACCAGCGCACCGTCGCCCTATACAGCTTAAAAATCGCC 124
D215G/R222N/F223Ir GGCGATTTTTAAGCTGTATAGGGCGACGGTGCGCTGGTTTTCGGGGATAATGTTGGGGAGCATCCCGATGCTGCCGACCGTCACGCCCTGTTGGTAGGCCTTCGAGGTGAGGCACGCTGCCGGG 124
gDF101 GCCCCGCTGGAGCTACTATGACA 23
gDF103 CATAAGCTGCATTGCGAACGACTA 24
gDF106 GGACGAGGCCCGAAAGCACAC 21
gDR101 TCGACGGGATGTGCCAGTTTG 21
gDR103 CCACACGGGCCCAGAGGTA 19
gDR106 TTCGGGGATAAAGCGGGGTAG 21
NotIF1 GTCGCGGCCGCCACCATGGAGCCTCCTGGAGACTGG 34
XhoIR2 AGTCTCGAGGTCAGTGGTTTGGGCTCCTCCCCGTG 33
sHveAF1 GTCGCGGCCGCCACCATGGAGCCTCCTGGAGGTTGG 36
sHveAR2 AGTCTCGAGGTCAGCTCCTCCCAGTGAATGCGGG 34
a

The underlined nucleotides indicate the sites of mutations.

HHS Vulnerability Disclosure