Table 2. Genes up-regulated in Ptf1a microarray at NF32.
Genes have been sorted based on their fold change in MA32 relative to control samples. Only those with greater than 2-fold upregulation are listed. Unigene ID numbers that did not represent a known gene and duplicated genes were removed from this table. p < 0.05.
| Gene Title | Unigene ID | Fold Change |
|---|---|---|
| Matrix metallopeptidase 8 | Xl.49512 | 5.21 |
| Fatty acid binding protein 7, brain | Xl.48742 | 5.00 |
| Thrombospondin 4 | Xl.9871 | 4.92 |
| Tubulin, beta 3 | Xl.57483 | 4.75 |
| Similar to oncomodulin | Xl.3153 | 4.70 |
| Fast troponin I | Xl.2142 | 4.62 |
| Myosin light chain, phosphorylatable, fast skeletal muscle | Xl.6263 | 4.60 |
| Oncomodulin | Xl.14726 | 4.48 |
| Calcium ATPase at 60A | Xl.11405 | 4.46 |
| Fast skeletal troponin C beta | Xl.1032 | 4.34 |
| SNAP25a | Xl.8686 | 4.32 |
| Slow troponin I | Xl.11074 | 4.30 |
| Neuritin 1-A | Xl.11951 | 4.04 |
| Low molecular weight neuronal intermediate filament | Xl.992 | 3.99 |
| Alpha-actinin-2 | Xl.34825 | 3.95 |
| Growth associated protein 43 | Xl.9994 | 3.90 |
| Similar to Parvalbumin (calcium binding protein) | Xl.25492 | 3.87 |
| Neuritin-B precursor | Xl.34198 | 3.85 |
| Neuro-oncological ventral antigen 1 | Xl.47571 | 3.81 |
| Solute carrier family 1 | Xl.20736 | 3.80 |
| Troponin I type 2 (skeletal, fast) | Xl.18396 | 3.78 |
| Myosin binding protein H | Xl.6142 | 3.77 |
| Guanine nucleotide binding protein (G protein), gamma 3 | Xl.24553 | 3.67 |
| Tropomyosin 2 a isoform 1 | Xl.21893 | 3.58 |
| Solute carrier family 1 | Xl.20736 | 3.58 |
| Muscle-related coiled-coil protein | Xl.57797 | 3.50 |
| Phosphoglycerate mutase 2 | Xl.84002 | 3.36 |
| Enolase 1 alpha | Xl.66912 | 3.34 |
| Calcium-dependent secretion activator 1 | Xl.26179 | 3.34 |
| Growth associated protein 43 | Xl.1133 | 3.33 |
| Enolase 3, beta muscle | Xl.19056 | 3.32 |
| Beta-synuclein | Xl.14705 | 3.26 |
| Sox10 | Xl.1588 | 3.24 |
| Actin, alpha skeletal muscle | Xl.70068 | 3.22 |
| Synuclein, gamma (breast cancer-specific protein 1) | Xl.11348 | 3.22 |
| Middle molecular weight neurofilament protein NF-M(1) | Xl.173 | 3.19 |
| Aspartyl beta-hydroxylase | Xl.23399 | 3.10 |
| RUN and FYVE domain containing 3 | Xl.8516 | 3.01 |
| Acetylcholine receptor subunit alpha-1-A | Xl.1118 | 3.00 |
| Desmin | Xl.2665 | 2.99 |
| Syntaxin binding protein 1 | Xl.26111 | 2.96 |
| Jun oncogene | Xl.541 | 2.93 |
| Dihydropyrimidinase-like 4 | Xl.77348 | 2.90 |
| Jun proto-oncogene | Xl.542 | 2.90 |
| Similar to calsequestrin 2 (cardiac muscle) | Xl.15700 | 2.87 |
| Protein tweety homolog 1-A | Xl.11254 | 2.85 |
| Collapsin response mediator protein 1 | Xl.50837 | 2.83 |
| Chondromodulin-I precursor | Xl.21971 | 2.79 |
| Synaptophysin | Xl.230 | 2.79 |
| Transcription factor Sp8 | Xl.49163 | 2.77 |
| Neural cell adhesion molecule L1 | Xl.21565 | 2.76 |
| Tubulin | Xl.8919 | 2.76 |
| Protocadherin 8 | Xl.72042 | 2.75 |
| CUGBP Elav-like family member 3-B | Xl.12160 | 2.73 |
| CUGBP Elav-like family member 3-A | Xl.986 | 2.73 |
| Pax6 | Xl.647 | 2.69 |
| Synaptophysin | Xl.232 | 2.66 |
| Dihydropyrimidinase-like 2 | Xl.3001 | 2.65 |
| Kinesin family member 5A | Xl.18417 | 2.64 |
| Middle molecular weight neurofilament protein NF-M(2) | Xl.174 | 2.61 |
| VENT homeobox 1 | Xl.1420 | 2.57 |
| MICAL-like 2 | Xl.34034 | 2.56 |
| Synaptotagmin 4 | Xl.48319 | 2.55 |
| Neuritin 1-A | Xl.11951 | 2.53 |
| Tubulin beta-2 chain | Xl.121 | 2.50 |
| Diacylglycerol kinase iota | Xl.16337 | 2.49 |
| Carboxypeptidase E | Xl.8483 | 2.46 |
| Cell adhesion molecule 3 precursor | Xl.23549 | 2.45 |
| Neuronal pentraxin-2 precursor | Xl.11864 | 2.45 |
| Reticulon-1-B | Xl.8555 | 2.45 |
| Actin, alpha skeletal muscle 3 | Xl.24656 | 2.43 |
| Lysyl oxidase homolog 3 precursor | Xl.13606 | 2.42 |
| Similar to myozenin 1 | Xl.21921 | 2.41 |
| Trimeric intracellular cation channel type A | Xl.45053 | 2.39 |
| Seizure protein 6 homolog precursor | Xl.51942 | 2.36 |
| Guanine nucleotide-binding protein G(O) alpha subunit 1 | Xl.20976 | 2.36 |
| Fox-1 homolog C | Xl.57891 | 2.35 |
| Coiled-coil domain containing 28B | Xl.9739 | 2.35 |
| Zinc finger protein ZIC 1 | Xl.1796 | 2.33 |
| RAB33A, member RAS oncogene family | Xl.47462 | 2.33 |
| Enah/Vasp-like | Xl.12544 | 2.32 |
| Wnt-8 | Xl.49 | 2.29 |
| Stathmin-like 3 | Xl.21810 | 2.29 |
| Hes-4-A | Xl.25977 | 2.20 |
| Sodium/potassium-transporting ATPase subunit beta-1- interacting protein 4 | Xl.55497 | 2.20 |
| Zinc finger protein 36, C3H type, homolog | Xl.24023 | 2.17 |
| Calcium channel, voltage-dependent, beta 3 subunit | Xl.53876 | 2.09 |
| Hes5.1 | Xl.48575 | 2.03 |