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. 2012 Aug 2;176(5):423–430. doi: 10.1093/aje/kws123

Table 1.

Type 2 Diabetes Mellitus Genome-wide Association Study Resultsa,b

Chromosome Position Most Significant SNP Meta P Value Odds Ratio In Gene Closest Gene eSNP Gene
  10 114748339  rs7903146 3.26 × 10−13 0.72 TCF7L2
  2 160922421  rs6718526 7.65 × 10−7 1.30 RBMS1 LY75
  3 64711617  rs2371765 8.90 × 10−7 1.22 ADAMTS9
  17 74333763  rs1531797 1.22 × 10−6 0.82 USP36 USP36
  1 202547459  rs16853272 2.47 × 10−6 1.90 PLEKHA6
  15 240948199  rs12148430 3.90 × 10−6  0.73 GABRB3
  14 71978830  rs2283381 5.86 × 10−6 1.24  RGS6
  20 60009590  rs17750066 5.98 × 10−6 0.64  TAF4
  21 37158147  rs7282868 6.63 × 10−6 1.27  HLCS
  17 62804441  rs8866 7.17 × 10−6 1.24  PITPNC1 PITPNC1
  1 183539106  rs1208517 8.73 × 10−6 1.29 IVNS1ABP

Abbreviations: eSNP, expression-associated single nucleotide polymorphism; rs, reference single nucleotide polymorphism (identification number); SNP, single nucleotide polymorphism.

a If multiple SNPs in linkage disequilibrium in the region were identified, the most significant SNP is noted, and the eSNP gene to any SNP in the region is noted. The P values reported are based on meta-analysis results from the Nurses' Health Study and the Health Professionals Follow-Up Study.

b ADAMTS9, ADAM metallopeptidase with thrombospondin type 1 motif, 9 gene; GABRB3, gamma-aminobutyric acid A receptor, beta 3 gene; HLCS, holocarboxylase synthetase gene; IVNS1ABP, influenza virus NS1A binding protein gene; LY75, lymphocyte antigen 75 gene; PITPNC1, phosphatidylinositol transfer protein, cytoplasmic 1 gene; PLEKHA6, pleckstrin homology domain containing, family A member 6 gene; RBMS1, RNA-binding motif, single-stranded interacting protein 1 gene; RGS6, regulator of G-protein signaling 6 gene; TAF4, TAF4 RNA polymerase II gene; TCF7L2, transcription factor 7-like 2 gene; USP36, ubiquitin-specific peptidase 36 gene.