Table 1.
Chromosome | Position | Most Significant SNP | Meta P Value | Odds Ratio | In Gene | Closest Gene | eSNP Gene |
---|---|---|---|---|---|---|---|
10 | 114748339 | rs7903146 | 3.26 × 10−13 | 0.72 | TCF7L2 | ||
2 | 160922421 | rs6718526 | 7.65 × 10−7 | 1.30 | RBMS1 | LY75 | |
3 | 64711617 | rs2371765 | 8.90 × 10−7 | 1.22 | ADAMTS9 | ||
17 | 74333763 | rs1531797 | 1.22 × 10−6 | 0.82 | USP36 | USP36 | |
1 | 202547459 | rs16853272 | 2.47 × 10−6 | 1.90 | PLEKHA6 | ||
15 | 240948199 | rs12148430 | 3.90 × 10−6 | 0.73 | GABRB3 | ||
14 | 71978830 | rs2283381 | 5.86 × 10−6 | 1.24 | RGS6 | ||
20 | 60009590 | rs17750066 | 5.98 × 10−6 | 0.64 | TAF4 | ||
21 | 37158147 | rs7282868 | 6.63 × 10−6 | 1.27 | HLCS | ||
17 | 62804441 | rs8866 | 7.17 × 10−6 | 1.24 | PITPNC1 | PITPNC1 | |
1 | 183539106 | rs1208517 | 8.73 × 10−6 | 1.29 | IVNS1ABP |
Abbreviations: eSNP, expression-associated single nucleotide polymorphism; rs, reference single nucleotide polymorphism (identification number); SNP, single nucleotide polymorphism.
a If multiple SNPs in linkage disequilibrium in the region were identified, the most significant SNP is noted, and the eSNP gene to any SNP in the region is noted. The P values reported are based on meta-analysis results from the Nurses' Health Study and the Health Professionals Follow-Up Study.
b ADAMTS9, ADAM metallopeptidase with thrombospondin type 1 motif, 9 gene; GABRB3, gamma-aminobutyric acid A receptor, beta 3 gene; HLCS, holocarboxylase synthetase gene; IVNS1ABP, influenza virus NS1A binding protein gene; LY75, lymphocyte antigen 75 gene; PITPNC1, phosphatidylinositol transfer protein, cytoplasmic 1 gene; PLEKHA6, pleckstrin homology domain containing, family A member 6 gene; RBMS1, RNA-binding motif, single-stranded interacting protein 1 gene; RGS6, regulator of G-protein signaling 6 gene; TAF4, TAF4 RNA polymerase II gene; TCF7L2, transcription factor 7-like 2 gene; USP36, ubiquitin-specific peptidase 36 gene.