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. 2012 Nov 15;8(11):e1003064. doi: 10.1371/journal.pgen.1003064

Figure 4. Maximum likelihood analysis of a MUSCLE alignment of 19 of the identified putative VCP protein sequences from Nannochloropsis oceanica CCMP1779 (Nanno) and the annotated LHC and LHCSR-like sequences from Phaeodactylum tricornutum (Phatr), Cyclotella cryptica (Cycry), Thalassiosira pseudonana (Thaps), Aureococcus anophagefferens (Auran), and the LHCSR-like sequences from Chlamydomonas reinhardtii (Cre), Ostreococcus tauri (Ossta), Physcomitrella patens (Ppa), Scenedesmus obliquus (Sceob), and Volvox carteri (Volca).

Figure 4

Nannochloropsis VCP model 19 (Nanno_19) was not included in the analysis because the sequence is incomplete, causing it to be erroneously assigned as an out-group.