Table 2. Occurrence of repetitive sequences in the CCMP1779 genome.
Repeat | Copy number* | Length occupied (bps) | Genome fraction (%) | |
Interspersed repeats | LINE | 2 | 659 | 0.00 |
LTR elements | 17 | 7863 | 0.03 | |
DNA elements | 736 | 194338 | 0.68 | |
Unclassified | 1270 | 214449 | 0.75 | |
Local repeats | Simple repeats | – | 1149204 | 4.00 |
Low complexity | – | 1353066 | 4.71 |
Copy number includes truncated elements and fragments, LINE long interspersed nuclear elements, LTR long terminal repeat.