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. 2004 Nov 1;1(6):421–434. doi: 10.1186/1479-7364-1-6-421

Table 3.

Distribution of χ2 test scores in SNPs selected for individual genotyping.

All SNPs Conforminga Non-conformingb
Selected SNPs 284 142 142

Number meeting quality criteria 263 135 128

p < 0.04c 90 59 31

p < 0.01c 41 24 17

a SNPs selected based on corroborating evidence from the haplotype-fitting procedure.

b SNPs selected based on a large Δp ^ but without supporting haplotype information.

c SNPs meeting this threshold in a χ2 test of allelic association with the HDL phenotype.

SNPs, single nucleotide polymorphisms.