Table 1.
List of the SNPs found in dbSNP database for MDM2 promoter
| Rs numbera | Positionb | SNPs IDc | MAFd |
|---|---|---|---|
| rs1144944 |
g.67,486,752 G > A |
−1494 |
25% |
| rs3730485 |
g.67,487,038_67,487,077del |
40 bp indel (−1208 to −1169) |
37% |
| rs2904506 |
g.67,487,080 T > G |
−1166 |
- |
| rs3930427 |
g.67,487,082 C > G |
−1164 |
- |
| rs3730486 |
g.67,487,509 C > T |
−737 |
0% |
| rs3730487 |
g.67,487,563A > G |
−683 |
0% |
| rs937282 |
g.67,488,064 C > G |
−182 |
50% |
| rs3730491 |
g.67,488,095 C > T |
−151 |
0% |
| rs2279744e | g.67,488,847 T > G | +601 | 35% |
aFrom dbSNP build 128.
bNCBI Build 36.1.
cPosition relative to the transcription start site (based on reference sequence mRNA).
dMinor allele frequencies (MAF) were calculated with 91 unrelated European individuals in this study.
eFor comparison purposes, we included SNP309 (+601 in our nomenclature) associated with the internal promoter P2.