Table 1. Eleven newly assembled and three publicly available Cronobacter genomes analyzed in this study.
| Species | Strain | Source | Country | Genome size (Mbp)d | MLST Sequence Type | EBI Accession Number |
| C. sakazakii | 680 | Clinical | USA | 4.36 | 8 | CALG01000001-CALG01000201 |
| 696 | Clinical | France | 4.90 | 12 | CALF01000001-CALF01000569 | |
| 701 | Clinical | France | 4.75 | 4 | CALE01000001-CALE01000768 | |
| E899a | Clinical | USA | 3.96 | 4 | AFMO00000000 | |
| BAA-894a | Powdered formula | USA | 4.53 | 1 | NC_009778-NC_009780 | |
| C. malonaticus | 507 | Clinical | Czech Republic | 4.45 | 11 | CALD01000001-CALD01000249 |
| 681b | Clinical | USA | 4.50 | 7 | CALC01000001-CALC01000171 | |
| C. turicensis | 564 | Clinical | USA | 4.50 | 5 | CALB01000001-CALB01000114 |
| z3032a,c | Clinical | Switzerland | 4.60 | 19 | NC_013282-NC_013285 | |
| C. dublinensis | 582 | Unknown | UK | 4.68 | 36 | CALA01000001-CALA01000427 |
| 1210d | Environment | Ireland | 4.59 | 106 | CAKZ01000001-CAKZ01000221 | |
| C. muytjensii | 530 | Infant formula | Denmark | 4.53 | 49 | CAKY01000001-CAKY01000365 |
| C. universalis | NCTC 9529T | Environmental | UK | 4.45 | 54 | CAKX01000001-CAKX01000231 |
| C. condimenti | 1330e | Food | Slovakia | 4.46 | 98 | CAKW01000001-CAKW01000155 |
a
Strains for which genome sequence is publicly available; E899 appears to lack plasmid sequences.
b
C. malonaticus species type strain (LMG 23826T).
c
C. turicensis species type strain (LMG 23827T).
d
C. dublinensis species type strain (LMG 23823T).
e
C. condimenti species type strain (LMG 26250T).
f
Sizes of newly sequenced genomes were derived from the sum of the length of all contigs from de novo assembly.