TABLE 2.
Complete list of the transcription factor-binding sites predicted in the tissue factor promoter-PAK1 interacting region using Promo 3.0 software analysis
The transcription factors selected for EMSA are highlighted.
Transcription factor | No. of sites | Activator/repressor | Function |
---|---|---|---|
TCF-4E (T02878) | 2 | Activator | Associated with reduced survival in estrogen receptor-α breast cancer cells |
Positive regulation of epithelial cell proliferation | |||
GR (T05076) | 1 | Activator/repressor | Regulation of genes controlling development, metabolism, and immune response |
GR-β (T01920) | 14 | Activator/repressor | |
GR-α (T00337) | 7 | Activator/repressor | |
XBP-1 (T00902) | 1 | Activator | Immune system and cellular stress response |
AP-2αA (T00035) | 4 | Activator/repressor | Differentiation and development of neural crestal cells |
C/EBPβ(T00581) | 19 | Repressor | Inflammatory and immune responses |
HOXD9 (T01424) | 2 | Activator | Morphogenesis |
HOXD10 (T01425) | 2 | Activator | Differentiation and limb development |
TFIID (T00820) | 1 | Activator | Basal transcription and transcription initiation |
FOXP3 (T04280) | 2 | Repressor | Immune system responses |
YY1 (T00915) | 2 | Activator/repressor | Proposed core component of chromatin remodeling complexes |
GATA-1 (T00306) | 2 | Activator | Platelet aggregation and formation |
Cell growth and cancer | |||
TFII-I (T00824) | 2 | Activator/repressor | Growth factor signaling. Implications in cancer |
HNF-1A (T00368) | 1 | Activator | Liver-specific genes. Glucose homeostasis |
PXR-1:RXR-α (T05671) | 1 | Activator/repressor | Assembly of functional peroxisomes (PXR-1) |
Mediator of retinoids (RXR-α) | |||
c-Ets-1 (T00112) | 1 | Activator/repressor | Stem cell development, cell senescence and death, and tumorigenesis |
STAT4 (T01577) | 1 | Activator | Mediation of cellular responses to IL-12 in T-lymphocytes |
Signaling molecule for TH1 differentiation | |||
AP-1 (T00029) | 1 | Activator | Differentiation, proliferation, and apoptosis |
c-Jun (T00133) | 1 | ||
LEF-1 (T02905) | 1 | Activator | Wnt signaling |