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. 2012 Nov 19;7(11):e47401. doi: 10.1371/journal.pone.0047401

Table 1. Statistics of DGE sequencing.

Summary Eggs 3rd instar larvae Pupae Male Adults Female Adults Averages
Raw Data 6,115,004 6,066,042 5,961,614 6,126,227 5,911,019 6,035,981
Distinct Raw Data 206,746 232,570 168,371 220,376 264,404 218,493
Clean Tag 5,998,487 5,944,052 5,867,100 5,988,301 5,746,384 5,908,865
Distinct Clean Tag 90,360 110,650 73,963 90,975 106,094 94,408
Clean Tag/Raw Tag 98.09% 97.99% 98.41% 97.75% 97.21% 97.89%
All Tag Mapping to Gene 3,916,598 3,475,226 3,698,670 3,310,426 3,090,658 3,498,316
All Tag Mapping to Gene1) 65.29% 58.47% 63.04% 55.28% 53.78% 59.17%
Distinct All Tag Mapping to Gene 34,495 35,118 27,988 29,216 35,241 32,412
Distinct All Tag Mapping to Gene1) 38.18% 31.74% 37.84% 32.11% 33.22% 34.62%
Unambiguous Tag mapping to Gene 3,554,919 3,276,273 3,340,732 2,822,317 2,788,593 3,156,567
Unambiguous Tag mapping to Gene1) 59.26% 55.12% 56.94% 47.13% 48.53% 53.40%
Distinct Unambiguous Tag mapping to Gene 30,788 32,362 24,948 25,748 31,796 29,128
Distinct Unambiguous Tag mapping to Gene1) 34.07% 29.25% 33.73% 28.30% 29.97% 31.06%
All Tag-mapped Genes 13,133 14,591 11,075 11,287 13,147 12,647
All Tag-mapped Genes2) 29.22% 32.47% 24.64% 25.12% 29.25% 28.14%
Unambiguous Tag-mapped Genes 11,384 12,885 9,493 9,693 11,484 10,988
Unambiguous Tag-mapped Genes2) 25.33% 28.67% 21.12% 21.57% 25.55% 24.45%
Unknown Tag 1,770,338 2,193,724 1,883,472 2,470,385 2,302,386 2,124,061
Unknown Tag1) 29.51% 36.91% 32.10% 41.25% 40.07% 35.97%
Distinct Unknown Tag 51,283 69,065 42,302 57,548 65,191 57,078
Distinct Unknown Tag1) 56.75% 62.42% 57.19% 63.26% 61.45% 60.21%

Notes:

1)

, % of Clean Tag;

2)

, % of Reference Unigenes.