Table 1. Statistics of DGE sequencing.
Summary | Eggs | 3rd instar larvae | Pupae | Male Adults | Female Adults | Averages |
Raw Data | 6,115,004 | 6,066,042 | 5,961,614 | 6,126,227 | 5,911,019 | 6,035,981 |
Distinct Raw Data | 206,746 | 232,570 | 168,371 | 220,376 | 264,404 | 218,493 |
Clean Tag | 5,998,487 | 5,944,052 | 5,867,100 | 5,988,301 | 5,746,384 | 5,908,865 |
Distinct Clean Tag | 90,360 | 110,650 | 73,963 | 90,975 | 106,094 | 94,408 |
Clean Tag/Raw Tag | 98.09% | 97.99% | 98.41% | 97.75% | 97.21% | 97.89% |
All Tag Mapping to Gene | 3,916,598 | 3,475,226 | 3,698,670 | 3,310,426 | 3,090,658 | 3,498,316 |
All Tag Mapping to Gene1) | 65.29% | 58.47% | 63.04% | 55.28% | 53.78% | 59.17% |
Distinct All Tag Mapping to Gene | 34,495 | 35,118 | 27,988 | 29,216 | 35,241 | 32,412 |
Distinct All Tag Mapping to Gene1) | 38.18% | 31.74% | 37.84% | 32.11% | 33.22% | 34.62% |
Unambiguous Tag mapping to Gene | 3,554,919 | 3,276,273 | 3,340,732 | 2,822,317 | 2,788,593 | 3,156,567 |
Unambiguous Tag mapping to Gene1) | 59.26% | 55.12% | 56.94% | 47.13% | 48.53% | 53.40% |
Distinct Unambiguous Tag mapping to Gene | 30,788 | 32,362 | 24,948 | 25,748 | 31,796 | 29,128 |
Distinct Unambiguous Tag mapping to Gene1) | 34.07% | 29.25% | 33.73% | 28.30% | 29.97% | 31.06% |
All Tag-mapped Genes | 13,133 | 14,591 | 11,075 | 11,287 | 13,147 | 12,647 |
All Tag-mapped Genes2) | 29.22% | 32.47% | 24.64% | 25.12% | 29.25% | 28.14% |
Unambiguous Tag-mapped Genes | 11,384 | 12,885 | 9,493 | 9,693 | 11,484 | 10,988 |
Unambiguous Tag-mapped Genes2) | 25.33% | 28.67% | 21.12% | 21.57% | 25.55% | 24.45% |
Unknown Tag | 1,770,338 | 2,193,724 | 1,883,472 | 2,470,385 | 2,302,386 | 2,124,061 |
Unknown Tag1) | 29.51% | 36.91% | 32.10% | 41.25% | 40.07% | 35.97% |
Distinct Unknown Tag | 51,283 | 69,065 | 42,302 | 57,548 | 65,191 | 57,078 |
Distinct Unknown Tag1) | 56.75% | 62.42% | 57.19% | 63.26% | 61.45% | 60.21% |
Notes:
, % of Clean Tag;
, % of Reference Unigenes.