Table 2.
Top 50 differentially expressed tags between ROP-Os/+ and C57-Os/+kidneys
| TAG | ROP-Os | C57-Os | P-Value | Gene Symbol | Gene Name |
|---|---|---|---|---|---|
| CTATCCTCTC |
873 |
613 |
1.47E-10 |
Gpx3 |
Glutathione peroxidase 3 |
| ATTAACTTGG |
54 |
14 |
75E-06 |
Glud1 |
Glutamate dehydrogenase 1 |
| TGGTTGCTGG |
8 |
42 |
2.53E-05 |
Nrp2b |
Neuropilin2b |
| TCAAAAAAAA |
15 |
0 |
0.000115878 |
Pea15 |
Phosphoprotein enriched in astrocytes 15 |
| ACAAAAAAAA |
20 |
2 |
0.000138392 |
Pde6c |
Phosphodiesterase 6C, cGMP specific, cone, alpha prime |
| AACTTGATTA |
14 |
0 |
0.000237608 |
Ndufa12 |
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 |
| GTTCACTTTC |
27 |
6 |
0.000390333 |
Atp5e |
ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit |
| CTGCTGTAAT |
15 |
2 |
0.000577048 |
Aspm |
Asp (abnormal spindle)-like, microcephaly associated (Drosophila) |
| TGTTGTGTTT |
0 |
15 |
0.000858214 |
Lman2l |
Lectin, mannose-binding 2-like |
| GTGAGCCCAT |
0 |
14 |
0.001280824 |
Hsp90ab1 |
Heat shock protein 90 kDa alpha (cytosolic), class B member 1 |
| GCCACGCCCC |
24 |
6 |
0.001296626 |
Hpd |
4-hydroxyphenylpyruvic acid dioxygenase |
| ATTCTCCAGT |
14 |
39 |
0.0017137 |
Rpl23 |
Ribosomal protein L32 |
| GTCCTGAGAG |
9 |
0 |
0.002106134 |
Vamp8 |
Vesicle-associated membrane protein 8 |
| ATAAAAAAAA |
9 |
0 |
0.002106134 |
Bag4 |
BCL2-associated athanogene 4 |
| ATTCTAACAT |
15 |
2 |
0.002151531 |
Acadm |
Acyl-Coenzyme A dehydrogenase, medium chain |
| TGGATGCCTT |
1 |
16 |
0.002228166 |
Adh1 |
Alcohol dehydrogenase |
| GATTCCGTGA |
1 |
4 |
0.002494576 |
Rpl37 |
Ribosomal protein L37 |
| GCTTTGAATG |
19 |
4 |
0.002494576 |
Atpif1 |
ATPase inhibitory factor 1 |
| TGTCATCTAG |
6 |
30 |
0.000282 |
Rpsa |
Ribosomal protein SA (laminin receptor like 1) |
| TGCTGCTCCC |
0 |
12 |
0.00287027 |
Gyk |
Glycerol kinase |
| GCTGGCCTCC |
1 |
15 |
0.003314916 |
Rhoq |
Ras homolog gene family, member Q |
| GCCAAGTGGA |
22 |
6 |
0.0041826 |
Eef2 |
Eukaryotic translation elongation factor 2 |
| GTTTGTAAAA |
22 |
6 |
0.0041826 |
Acsm3 |
Acyl-CoA synthetase medium-chain family member 3 |
| AGATAACACA |
8 |
0 |
0.004417209 |
Rere (atrophin-2) |
Arginine glutamic acid dipeptide (RE) repeats |
| AAGACCTATG |
39 |
17 |
0.004902036 |
Dbi |
Diazepam binding inhibitor |
| ATCCGATTCC |
11 |
31 |
0.005368014 |
Miox |
myo-inositol oxygenase |
| GTCAATGACG |
1 |
13 |
0.007371123 |
Aqp1 |
Aquaporin1 |
| TCAGGCTGCC |
180 |
130 |
0.008291421 |
Fth1 |
Ferritin heavy chain1 |
| TTGTTAGTGC |
36 |
66 |
0.008331722 |
Mdh1 |
Malate dehydrogenase 1 |
| CTAGTCTTTG |
22 |
7 |
0.008750438 |
Rps29 |
Ribosomal protein S29 |
| CTGCTGTGGA |
22 |
7 |
0.008750438 |
Hmgcs2 |
3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 |
| AGAGACAAGG |
46 |
23 |
0.008962126 |
Ndrg1 |
N-myc downstream regulated gene 1 |
| GATCAGAAAA |
7 |
0 |
0.009358827 |
Prdm16 |
PR domain containing 16 |
| GTGTGATACA |
7 |
0 |
0.009358827 |
Pccb |
propionyl Coenzyme A carboxylase, beta polypeptide |
| CAGTTGGTTC |
7 |
0 |
0.009358827 |
Mm.399814 |
Transcribed locus |
| CAGTAAAAAA |
7 |
0 |
0.009358827 |
Map3k7ip1 |
Mitogen-activated protein kinase kinasekinase 7interacting protein 1 |
| AACTTTTAAA |
7 |
0 |
0.009358827 |
Hp1bp3 |
Heterochromatin protein 1, binding protein 3 |
| GCTGTATTCA |
7 |
0 |
0.009358827 |
Folh1 |
Folate hydrolase |
| AATAAAAACT |
7 |
0 |
0.009358827 |
FBXL12 |
F-box and leucine-rich repeat protein 12 |
| TTTGTGACTG |
7 |
0 |
0.009358827 |
Ctbp1 |
C-terminal binding protein 1 |
| AGATCTGCCC |
7 |
0 |
0.009358827 |
Atp6v1g1 |
ATPase, H+ transporting, lysosomal V1 subunit G1 |
| CTGCGGGTCT |
7 |
0 |
0.009358827 |
Angptl7 |
Angiopoietin-like 7 |
| GACCGTCTCA |
0 |
9 |
0.0098287 |
Slc4a4 |
Solute carrier family 4 (anion exchanger), member 4 |
| TTGGACTGAG |
0 |
9 |
0.0098287 |
Gabarapl2 |
Gamma-aminobutyric acid (GABA-A) receptorassociated protein-like 2 |
| TGATTTTGAA |
9 |
1 |
0.01011074 |
Por |
P450 (cytochrome) oxidoreductase |
| GAGACTAGCA |
3 |
15 |
0.010247643 |
Tspan3 |
Tetraspanin 3 |
| GTCGTGCCAT |
14 |
33 |
0.010481768 |
Nudt19 |
Nudix (nucleoside diphosphate linked moiety X)-typemotif 19 |
| TGAGGGGAGC |
1 |
12 |
0.011021395 |
Flrt2 |
Fibronectin leucine rich transmembrane protein 2 |
| TGCCCCCTCC |
1 |
12 |
0.011021395 |
Cgnl1 |
Cingulin-like 1 |
| TAGCTTTAAA | 74 | 45 | 0.011671747 | Igfbp7 | Insulin-like growth factor binding protein 7 |
Mitochondrial, unknown, and ambiguous tags (those that match multiple genes) were excluded from the analysis.