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. Author manuscript; available in PMC: 2013 Nov 19.
Published in final edited form as: Chem Res Toxicol. 2012 Aug 22;25(11):2310–2321. doi: 10.1021/tx300198h

Table 2.

Proteins significantly altered expression in DEDC exposure group vs. controls identified using pH 7–11 isoelectric focusing.

Average ratio DEDC Level vs. controlsa t-testb(p <) Accession No.c Protein identificationd Protein

−1.94 .01 ECHA_RAT Q64428 Hydroxyacyl-Coenzyme Adehydrogenase
−1.91 .01 77,15(l),0,23%
−1.79 .01 56,12(1),2,12%
−2.01 .01

1.22 .05 CN37_RAT P13233 243,11,9,23% 2',3'-cyclic-nucleotide 3'-phosphodiesterase-Rattus norvegicus
1.3 .05 288,16,7,30%
1.33 .05 249,17,6,33%
1.25 .05 120,12,4,23%

1.32 .05 DHPR_RAT P11348 86,6,3,18% Dihydropteridine reductase- Rattus norvegicus

1.33 .05 GSTP1_RAT P04906 71,7,1,30% Glutathione S-transferase P- Rattus norvegicus

1.38 .05 MBP_RAT P02688 273,16,7,59% Myelin basic protein S- Rattus norvegicus
1.4 .05 145,12,3,48%
a

average volume ratios for each protein spot identified

b

level of significance determined by students t-test using DeCyder software version 6.5 using the mixed sample internal standard methodology

c

Swiss-Prot database

d

Imported from MASCOT and GPS Explorer. Data include predicted MW and pi to correlate with gel position (see supplementary material for annotated gel images), and the additional four scores: the four numbers associated with the protein identifications: e.g., 951 ,16(1)2 ,33 ,31%4 represent:

1MOWSE score. MOlecular Weight SEarch score, a statistic calculated by the MASCOT database search algorithm. The 95th percentile cutoff is calculated for each search and indicated at the bottom of each analysis summary. About 5% of random matches could yield higher MOWSE scores. See matrixscience.com for more details.

2peptide #. number of peptide ion masses matched (number of un-matched ions).

3ms2 #. number of matching peptide ions with MS/MS data.

4(%coverage). Percent of the amino acids accounted for by the matching peptides