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Pairwise distance matrix analysis of six selected groups
| Groupa | No. of SNP differences (SD) |
|||||
|---|---|---|---|---|---|---|
| H7 | eae negative | H2 | O111 EPEC | O111:H8 | O111:H11 | |
| H7 | ||||||
| eae negative | 57,246 (107) | |||||
| H2 | 58,029 (139) | 21,523 (77) | ||||
| O111 EPEC | 59,530 (105) | 23,107 (98) | 23,442 (113) | |||
| O111:H8 | 59,498 (126) | 23,993 (75) | 22,558 (97) | 21,427 (83) | ||
| O111:H11 | 59,417 (113) | 24,157 (98) | 22,717 (123) | 21,512 (84) | 4,324 (35) | |
| O26:H11 | 57,176 (108) | 21,913 (78) | 22,138 (107) | 24,045 (102) | 6,556 (42) | 3,617 (37) |
Groups are as shown in Fig. 3.
