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. 2012 Dec;86(24):13745–13755. doi: 10.1128/JVI.02244-12

TABLE 1.

Primers and probes for quantitative real-time quantitative PCR and RT-PCR

Transcript Forward primer Reverse primer Probea
IE2 86 TGACCGAGGATTGCAACGA CGGCATGATTGACAGCCTG TGGCAGAACTCGGTGACATCCTCGCC
IE2 exon 5 GCGCAATATCATGAAAGATAAGAAC GATTGGTGTTGCGAAACATG TCGGCGGGGTGGC
UL32 GGTTTCTGGCTCGTGGATGTCG CACACAACACCGTCGTCCGATTAC SYBR green
UL55 AGCTGCGTGACCATCAACCAAACC CTGCGAGTAAAGTTCCAGTACCC SYBR green
UL77 CGTTGCCCGGGAACG GGTGTGAAAGCGGATAAAGGG ACCTAGCTACTTTGGAATCACGCAGAACGA
UL83 TCTTCCTGGAGGTACAAGCCA CAGCCACGGGATCGTACTG ACGCGAGACCGTGGAACTGCG
UL84 AGACATTGGGACCCTCCGTC GCGGTGATTCGTTCGGG TGGACGATTGGAGCTAG
α-Tubulin AGATGCCAAGTGACAAGACC TCCAACACAAGGTCAATGATCTC SYBR green
GAPDH promoter TTTCATCCAAGCGTGTAAGGG CAGGACTGGACTGTGGGCA CCCCGTCCTTGACTCCCTAGTGTC
a

All TaqMan probes have a 5′ 6-carboxyfluorescein (FAM) and 3′ black hole quencher (BHQ) modification.