TABLE 1.
EST clone | Best hit in GenBank | GenBank accession no. | GO term | Biological function | Microarray expression in midgut |
|
---|---|---|---|---|---|---|
TYLCV | SLCV | |||||
HBT008_F09_T3_078 | 70-kDa heat shock | EE597405 | 000940 | Response to heat, protein folding | 1.65 | 1.51 |
TOMOV-BT003_A05 | OS-D-like | EE599211 | 0009700 | Sensory perception | 2.81 | |
BT-H-034-1-H5-T3_H05 | Pantothenate kinase 4 | EE596485 | 0015937 | Coenzyme A biosynthesis | 5.74 | |
BT-H-032-1-C9-T3_C09 | Transmembrane assembly | EE596401 | 0006928 | Cellular component movement | 3.96 | |
BT-TYLCV-053-1-H9-T3_H09 | Checkpoint-like | EE601807 | 0000075 | Cell cycle checkpoint | 3.22 | |
BT-H-020-1-E2-T3_E02 | Cathepsin B protease | EE595866 | 000691 | Autophagy, proteolysis response to stress | 2.09 | |
BT-TYLCV-018-1-H4-T3_H04 | Sugar transporter | EE600420 | 000535 | Glucose transmembrane transporter | 2.01 | |
BT-TOMOV-040-1-G8-T3_G08 | Btk-1 | EE598908 | Immunity | 1.59 | ||
HBT006_G06_T3_051 | Cathepsin F protease | EE597298 | 000658 | Proteolysis, receptor-mediated endocytosis | 1.59 | |
BT-TYLCV-056-1-F6-T3_F06 | ATP synthase | EE601889 | 0042776 | ATP synthesis-coupled proton transport | -1.7 | -2.6 |
BT-TOMOV-042-1-F9-T3_F09 | NADH dehydrogenase subunit 1 | EE599001 | 0005747 | Mitochondrial respiratory chain complex I | 2.7 | |
BT-TYLCV-057-1-E4-T3_E04 | Nuclear envelope membrane protein | EE601922 | 001503 | Transmembrane transport | 2.58 | |
BT-TYLCV-051-1-A8-T3_A08 | Fatty acid binding protein | EE601683 | 000521 | Transporter activity | 1.97 | |
TOMOV-BT012_G05 | Sugar transporter | EE599789 | 000535 | Glucose transmembrane transporter activity | 2.01 | |
BT-HINST-004-1-C2-T3_C02 | ATP synthase subunit C | EE602876 | 0040007 | Cytoplasmic membrane-bounded vesicle | 1.88 | |
TOMOV-BT012_C02 | Phosphoglycerate mutase 1 | EE599756 | 0006096 | Glycolysis | 1.55 | |
BT-TYLCV-045-1-A6-T3_A06 | Cytochrome c oxidase subunit III | EE601430 | 0006123 | Mitochondrial electron transport | 1.55 | |
BT-TOMOV-028-1-A9-T3_A09 | Adenine nucleotide translocator | EE598307 | 0055085 | Transmembrane transport | 1.54 | |
BT-TYLCV-042-1-B2-T3_B02 | ATP-binding FecE | EE601334 | 0006811 | Ion transport | 1.53 | |
BT-TYLCV-018-1-H4-T3_H04 | Acyl-coenzyme A esterase | EE600420 | 0004091 | Protein binding | 2.01 | |
BT-TYLCV-051-1-A8-T3_A08 | Putative fatty acid binding protein | EE601683 | 000521 | Transporter activity | 1.97 | |
TOMOV-BT012_C02 | Phosphoglycerate mutase 1 | EE599756 | 0006096 | Glycolysis | 1.55 | |
BT-TOMOV-020-1-D2-T3_D02 | Vitellogenin | EE597946 | 0006869 | Lipid transport | 1.67 | |
TYLCV006_F04 | Cytochrome P450 CYP6CX2 | EE602200 | 0055114 | Oxidation reduction | 1.78 | |
BT-TYLCV-058-1-F5-T3_F05 | Cytochrome oxidase I | EE601978 | 000612 | Mitochondrial electron transport | −1.78 | |
BT-TOMOV-028-1-E7-T3_E07 | Sodium-dependent glucose transporter | EE598330 | 000864 | Carbohydrate transport | −1.63 | |
BT-HINST-020-1-B11-T3_B11 | Apolipophorin III | EE603648 | 0008289 | Lipid binding | −1.69 | |
BT-TYLCV-025-1-B7-T3_B07 | Cytochrome c oxidase subunit II | EE600708 | 000609 | Precursor metabolites and energy | −1.57 |
EST (expressed sequence tag) clone name, best hit in GenBank, GenBank accession no. of the EST, GO (gene ontology) category, biological function of the expected protein, and the average ratio of three highly correlated biological replicates following the microarray experiments comparing viruliferous and nonviruliferous midguts with TYLCV or SLCV are shown.