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Summary of helix 6 predictions by PEP-FOLD
| Description of helix 6 peptide | Sequence of helix 6 peptidea | Energy value (kcal/mol) in predicted cluster |
|
|---|---|---|---|
| Minimum | Maximum | ||
| HIV-1 subtype B | |||
| Wild type | TLQEQIGWMTN | –11.878 | –11.873 |
| M250I variant | TLQEQIGWITN | –10.195 | –10.116 |
| HIV-1 subtype C | |||
| Wild type | TLQEQIAWMTS | –15.614 | –15.610 |
| M250I variant | TLQEQIAWITS | –14.863 | –14.857 |
The peptide spans amino acids 242 to 252. Amino acids 248, 250 and 252 are underscored.
