Table 2.
Locations and lengths of protein encoding genes in the mt genome of Dictyocaulus viviparus (Dv) and Dictyocaulus eckerti (De) as well as their initiation and termination codons and the lengths of the predicted proteins
|
Gene |
Positions and nucleotide sequence lengths (bp) |
Initiation and Termination codons and the amino acid sequence lengths |
||
|---|---|---|---|---|
| D. viviparus | D. eckerti | D. viviparus | D. eckerti | |
|
cox1 |
1-1579 (1578) |
1-1573 (1572) |
ATC-TAA (525) |
TTG-TAA (523) |
|
trnC |
1580-1634 (54) |
1574-1629 (55) |
|
|
|
trnM |
1636-1693 (57) |
1630-1686 (56) |
|
|
|
trnD |
1693-1749 (56) |
1686-1743 (57) |
||
|
trnG |
1749-1806 (57) |
1744-1798 (54) |
||
|
cox2 |
1806-2490 (684) |
1795-2482 (687) |
ATT-TAG (227) |
TTA-TAG (228) |
|
trnH |
2491-2549 (58) |
2483-2541 (58) |
||
|
rrnL |
2555-3516 (961) |
2549-3508 (959 |
|
|
|
nad3 |
3502-3835 (333) |
3482-3800 (318) |
GTT-TAA (110) |
TTG-TAG (105) |
|
nad5 |
3844-5414 (1570) |
3822-5388 (1566) |
GTT-T (523) |
GTT-T (522) |
|
trnA |
5414-5469 (55) |
5389-5444 (55) |
|
|
|
trnP |
5631-5686 (55) |
5603-5659 (56) |
|
|
|
trnV |
5684-5739 (55) |
5657-5712 (55) |
|
|
|
nad6 |
5739-6174 (435) |
5728-6142 (414) |
TTG-TAG (144) |
ATA-TAA (137) |
|
nad4L |
6181-6415 (234) |
6129-6383 (255) |
ATT-T (77) |
ATT-T (84) |
|
trnW |
6413-6469 (56) |
6376-6432 (56) |
|
|
|
trnE |
6469-6527 (58) |
6432-6490 (58) |
|
|
|
rrnS |
6504-7200 (696) |
6471-7165 (694) |
|
|
|
trnS (UCN) |
7191-7256 (65) |
7166-7219 (53) |
|
|
|
trnN |
7253-7306 (53) |
7218-7272 (54) |
|
|
|
trnY |
7304-7359 (55) |
7269-7325 (56) |
|
|
|
nad1 |
7350-8232 (882) |
7316-8138 (822) |
TTG-T (271) |
ATA-TAG (273) |
|
atp6 |
8234-8831 (597) |
8231-8813 (582) |
ATT-TAA (199) |
ATA-TAA (193) |
|
trnK |
8832-8891 (59) |
8815-8874 (59) |
|
|
|
trnL (UUR) |
8898-8954 (56) |
8875-8930 (55) |
|
|
|
trnS (AGN) |
8955-9005 (50) |
8931-8988 (57) |
|
|
|
nad2 |
8986-9802 (816) |
8989-9812 (823) |
TTG-T (271) |
ATA-TAG (273) |
|
trnI |
9842-9897 (55) |
9824-9880 (56) |
|
|
|
trnR |
9897-9965 (68) |
9881-9935 (54) |
|
|
|
trnQ |
9952-10006 (54) |
9936-9990 (54) |
|
|
|
trnF |
10006-10064 (58) |
9990-10047 (57) |
|
|
|
cob |
10050-11103 (1053) |
10034-11084 (1050) |
ATA-T (350) |
ATG-T (349) |
|
trnL (CUN) |
11161-11215 (54) |
11142-11197 (55) |
|
|
|
cox3 |
11216-11987 (771) |
11197-11989 (792) |
TTG-TAA (256) |
TTG-TAA (263) |
|
trnT |
11982-12034 (52) |
11963-12019 (56) |
|
|
| nad4 | 12038-13262 (1224) | 12077-13244 (1167) | TTA-TAG (407) | ATA-TAG (388) |
Gene abbreviations are according to [69].