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. 2012 Apr 19;11:47. doi: 10.1186/1475-2859-11-47

Table 3.

Primers used in PCR and DNA sequencing reactions. F: forward primer, R: reverse primer, underlined: restriction endonuclease site

Name Sequence (5-3) Application
FwtdpgA
CGGGATCCACCATGTCGATCCTTAACG
Amplifying and cloning
RwtdpgA
AGGAATTCTCATGATTGGTTTCCAGAC
 
FdpgA_3.5 K
CGGGATCCACCATGTCCATCCTGAACG
 
RdpgA_3.5 K
AGGAATTCTTAGCAGTGATGGTGAT
 
FdpgA_AO
GGAATTCACCATGTCCATCCTGAACGACTACAAGAG
 
RdpgA_AO
CAGGTCTCCAATTGTTAGCAGTGATGGTGATGGTGATG
 
FgroES_GAP
GGAATTCACCATGAATATTCGTCCATTGC
 
RgroES_GAP
GCTCTAGATTACGCTTCAACAATTGCCAG
 
FgroEL_GAP
GGAATTCACCATGGCAGCTAAAGACGTAAAATTCGGTAACG
 
RgroEL_GAP
GCTCTAGATTACATCATGCCGCCCATGCCACC
 
FgroES_AO
GGAATTCACCATGAATATTCGTCCATTGC
 
RgroES_AO
CAGGTCTCCAATTGTTACGCTTCAACAATTGCCAG
 
FgroEL_AO
GGAATTCACCATGGCAGCTAAAGACGTAAAATTCGGTAACG
 
RgroEL_AO
CAGGTCTCCAATTGTTACATCATGCCGCCCATGCCACC
 
F_ELS_PICZ
CCGCTCGAGTTTTGGTCATGCATGAGATC
 
R_ELS_PICZ
ATAGTTTAGCGGCCGCTTTTGAAGCTATGGTGTG
 
F_GroEL
TGTCCGTACCATGCTCTGAC
Copy number determination
R_GroEL
CAGGTAGCCACGGTCGAAC
 
F_D-PhgAT
GCCTGCTCCAGGTGTCTTGC
 
R_D-PhgAT
ACTGTCTAGCCAATTCAGCACC
 
F_Actin
AAAAGATCTGGCACCACACC
 
R_Actin
AGTGGTTCTACCGGAAGCG
 
5AOX1
GACTGGTTCCAATTGACAAGC
DNA sequencing
3AOX1 GCAAATGGCATTCTGACATCC