Table 4. Selected genes in guard cells that responded to sucrose. Signal intensities are normalized log2 values.
AGI Gene Identifier | Signal Intensity in Mannitol | Fold Change due to Sucrose | Gene Name/Description |
Photosynthesis | |||
At3g50820 | 7.2 | −17.5 | PSBO-2/PSBO2 (PHOTOSYSTEM II SUBUNIT O-2); oxygen evolving |
At1g51400 | 9.3 | −6.3 | photosystem II 5 kD photosystem II 5 kd protein |
At5g64040 | 9.8 | −4.0 | PSAN/(photosystem I reaction center subunit PSI-N); calmodulin binding |
At2g28000 | 8.6 | 3.8 | RuBisCO subunit binding-protein alpha subunit, chloroplast |
At3g56650 | 4.9 | −3.7 | thylakoid lumenal 20 kDa protein |
At3g16140 | 11.0 | −2.4 | PSAH-1/(photosystem I subunit H-1) |
At2g30570 | 13.4 | −2.0 | photosystem II reaction center W (PsbW) protein-related |
Transporters | |||
At1g61800 | 5.5 | 146.2 | GPT2/glucose-6-phosphate/phosphate translocator, putative |
At4g01010 | 9.0 | −15.7 | CNGC13/cyclic nucleotide-regulated ion channel, putative |
At2g48020 | 10.3 | −6.5 | sugar transporter, putative |
At1g61570 | 8.0 | 6.2 | TIM13/mitochondrial import inner membrane translocase |
At4g36670 | 13.3 | −4.4 | mannitol transporter, putative |
At1g71880 | 12.2 | −3.4 | SUC1/sucrose transporter/sucrose-proton symporter |
At3g19930 | 14.1 | −2.2 | STP4/sugar transport protein |
At4g00430 | 13.0 | 2.0 | TMP-C/plasma membrane intrinsic protein, putative |
Transcription factors and RNA regulation | |||
At5g49450 | 11.5 | −29.4 | BZIP1/bZIP family transcription factor |
At3g44750 | 4.7 | 25.5 | HD2A/histone deacetylase, putative |
At1g66390 | 5.1 | 12.9 | PAP2/myb family transcription factor, putative |
At1g56110 | 6.7 | 10.8 | NOP56 (ARABIDOPSIS HOMOLOG OF NUCLEOLAR PROTEIN NOP56) |
At5g53290 | 3.7 | 6.8 | AP2 domain-containing transcription factor, putative |
At4g14540 | 8.2 | −5.3 | NF-YB/CCAAT-box binding transcription factor subunit B |
At1g14920 | 5.9 | 5.2 | GAI (GA INSENSITIVE); transcription factor |
At1g03110 | 3.6 | 5.2 | transducin family protein/WD-40 repeat family protein |
At3g16770 | 14.8 | −4.7 | RAP2.3/AP2 domain-containing protein RAP2.3 |
At1g08460 | 9.6 | −3.3 | HDA8/histone deacetylase family protein |
At1g43160 | 13.6 | −3.3 | RAP2.6/AP2 domain-containing protein |
Signaling and posttranslation modifications | |||
At5g21170 | 10.0 | −24.9 | 5′-AMP-activated protein kinase beta-2 subunit, putative |
At2g44130 | 9.4 | −22.5 | kelch repeat-containing F-box family protein |
At3g59940 | 11.3 | −21.5 | APG4b/autophagy 4b |
At1g18350 | 6.6 | 10.0 | mitogen-activated protein kinase kinase (MAPKK), putative (MKK7) |
At1g48630 | 8.5 | 8.8 | RACK1B/guanine nucleotide-binding family protein |
At3g18130 | 6.5 | 8.3 | RACK1C/guanine nucleotide-binding family protein |
At4g38470 | 10.1 | −7.9 | protein kinase family protein |
At3g10530 | 4.8 | 7.2 | transducin family protein/WD-40 repeat family protein |
At2g38760 | 6.5 | 6.2 | ANN3/annexin 3/calcium binding, phospholipid binding |
At5g39030 | 9.1 | −5.4 | protein kinase family protein |
At1g80440 | 13.5 | −5.4 | kelch repeat-containing F-box family protein |
At1g50920 | 7.5 | 3.7 | GTP-binding protein-related |
At2g01570 | 7.0 | 2.0 | RGA1/gibberellin response modulator |
Carbohydrate metabolism and glycolysis | |||
At5g56870 | 12.4 | −380.9 | beta-galactosidase, putative/lactase, putative |
At4g17770 | 6.4 | 50.3 | TPS5/trehalose-phosphatase family protein |
At3g62410 | 10.8 | −30.5 | CP12 domain-containing protein |
At4g09020 | 6.9 | 19.1 | ISA3/isoamylase, putative/starch debranching enzyme, putative |
At2g18700 | 12.0 | −9.6 | TPS11/trehalose-phosphatase family protein |
At1g62660 | 9.8 | −9.1 | BFRUCT3/beta-fructosidase/invertase, vacuolar |
At4g39210 | 8.5 | 6.5 | APL3/ADP-glucose pyrophosphorylase large subunit |
At5g20250 | 13.5 | −6.4 | DIN10/raffinose synthase family protein |
At4g09510 | 6.6 | 4.7 | CINV2/invertase neutral, putative |
At3g03250 | 9.4 | 4.4 | UGP1/UDP-glucose pyrophosphorylase, putative/UGPase, putative |
At1g55120 | 7.7 | 4.3 | ATFRUCT5/(BETA-FRUCTOFURANOSIDASE 5) |
At2g36390 | 8.1 | 4.2 | SBE2-1; starch branching enzyme class II |
At3g06500 | 12.7 | −3.1 | beta-fructofuranosidase, putative/neutral invertase, putative |
At5g03650 | 8.6 | 2.9 | SBE2.2/(STARCH BRANCHING ENZYME 2.2) |
At5g20280 | 9.4 | 2.2 | sucrose-phosphate synthase 1F |
At4g29220 | 10.6 | −2.0 | PFK1/phosphofructokinase family protein |
Cell Wall | |||
At5g49360 | 12.8 | −410.0 | BXL1/glycosyl hydrolase family 3 protein/xylosidase |
At3g10740 | 9.6 | −8.5 | ASD1/arabinofuranosidase |
At4g32410 | 9.5 | 2.2 | CESA1/cellulose synthase, catalytic subunit, putative |
At1g12780 | 11.2 | −3.1 | UGE1/UDP-glucose 4-epimerase/UDP-galactose 4-epimerase |
Redox | |||
At5g49730 | 9.9 | −30.1 | ferric reductase-like transmembrane component family protein |
At3g22460 | 9.6 | −12.2 | cysteine synthase, putative/O-acetylserine sulfhydrylase, putative |
At1g03850 | 10.5 | −11.7 | glutaredoxin family protein |
At1g11530 | 10.4 | −7.5 | thioredoxin family protein |
Enzymes | |||
At5g24160 | 8.9 | −30.8 | SQP1,2/squalene monooxygenase 1,2/squalene epoxidase 1,2 |
At1g73600 | 6.9 | 20.8 | NMT3/phosphoethanolamine N-methyltransferase 3, putative |
At1g03090 | 9.7 | −17.1 | MCCA/methylcrotonyl-CoA carboxylase alpha chain, mitochondrial |
At1g62540 | 7.0 | 17.0 | flavin-containing monooxygenase family protein/FMO family protein |
At1g55020 | 9.9 | −12.7 | LOX1/lipoxygenase1 |
At5g08570 | 6.9 | 8.8 | pyruvate kinase, putative |
At4g34200 | 10.1 | 6.2 | D-3-phosphoglycerate dehydrogenase, putative/3-PGDH, putative |
Other | |||
At4g35770 | 10.5 | −141.8 | SEN1/DIN1/senescence-associated protein |
At5g22920 | 10.7 | −55.5 | zinc finger (C3HC4-type RING finger) family protein |
At1g05340 | 9.4 | −37.4 | expressed protein |
At1g80130 | 5.1 | 36.0 | expressed protein |
At4g18630 | 4.7 | 24.5 | expressed protein |
At4g27450 | 11.2 | −21.1 | expressed protein |
At1g52930 | 5.2 | 15.0 | brix domain-containing protein |
At5g23850 | 5.5 | 11.9 | expressed protein |
At5g58650 | 8.3 | −9.7 | expressed protein |
At1g65370 | 3.8 | 8.8 | meprin and TRAF homology domain-containing protein |
At4g34950 | 9.0 | 8.4 | nodulin family protein |
At1g01770 | 9.3 | −8.1 | expressed protein |
At4g13750 | 5.2 | 6.9 | NOV/No Vein/auxin response |
FDR <0.05 for all genes shown. Positive fold changes for genes up-regulated in sucrose compared with mannitol, negative fold changes indicate down regulation in sucrose compared with mannitol. Signal intensity is the normalized log2 signal intensity for each gene in the mannitol treatment (calls present in at least one treatment, sucrose or mannitol). The average normalized log 2 signal intensity on the arrays (calls present) was 7.2.