Table A3.
Total 16S-rNA and resistance gene abundances (per gram-sediment) in the Almendares River.
| Season/site | 16S-rRNA Gram |
tet(M) 16S |
tet(O) 16S |
tet(Q) 16S |
tet(W) 16S |
erm(B) 16S |
erm(E) 16S |
blaSHV 16S |
blaOXA 16S |
blaTEM 16S |
|---|---|---|---|---|---|---|---|---|---|---|
| DRY SEASON | ||||||||||
| 3A | 10.2 (0.3) | 6.2 (0.6) | 6.5 (0.9) | 6.9 (0.6) | 6.7 (0.5) | 5.0 (0.4) | 5.2 (0.7) | 5.1 (0.2) | 5.9 (0.1) | 4.9 (0.3) |
| 4 | 10.1 (0.3) | 6.0 (0.2) | 6.1 (0.3) | 6.8 (0.3) | 6.6 (0.2) | 4.6 (1.0) | 5.4 (0.3) | 5.0 (0.5) | 5.1 (1.0) | 4.4 (0.3) |
| 5 | 9.6 (0.4) | 5.1 (0.5) | 5.6 (0.5) | 5.9 (0.6) | 5.6 (0.6) | 5.0 (0.2) | 4.8 (0.4) | 5.0 (0.4) | 5.4 (0.8) | 4.5 (0.6) |
| 5A | 9.4 (0.5) | 4.1 (0.5) | 4.3 | 4.8 (0.2) | 4.7 (0.5) | 4.4 (0.6) | 3.7 (1.3) | 4.9 (0.5) | 3.9 (0.4) | 5.1 (0.4) |
| 6 | 9.9 (0.1) | 3.8 (0.6) | 3.8 (0.7) | 4.1 (0.2) | bdl | 5.4 (0.4) | 4.0 (2.0) | 5.1 (0.2) | bdl | 3.8 (0.9) |
| 7 | 9.6 (0.3) | 4.3 (0.3) | 4.2 (0.5) | 4.6 (0.4) | 4.3 (1.2) | 5.2 (0.9) | 4.7 (0.9) | 4.8 (0.7) | bdl | 4.0 (0.7) |
| 8 | 9.3 (0.9) | 4.2 (0.6) | 4.3 (1.7) | 4.3 (0.9) | 4.4 (0.7) | 5.5 (1.2) | 4.2 (1.3) | 4.5 (1.6) | 4.1 (1.5) | 3.7 (1.4) |
| 9 | 9.6 (0.5) | bdl | 4.3 (0.5) | 4.3 (0.5) | 4.3 (0.6) | 4.7 (0.6) | 3.8 (1.1) | 4.1 (0.3) | bdl | bdl |
| WET-SEASON | ||||||||||
| 3A | 10.4 (0.3) | 6.1 (0.4) | 5.3 (1.4) | 6.5 (0.3) | 6.2 (0.3) | 4.1 (0.7) | 5.2 (1.3) | 4.2 (0.6) | 5.7 (1.5) | 4.8 (0.7) |
| 4 | 10.4 (0.3) | 5.4 (0.5) | 4.8 (0.6) | 4.5 (0.2) | 5.5 (0.6) | 4.5 (0.6) | 5.3 (1.1) | 4.5 (0.2) | 5.6 (0.2) | 4.9 (0.2) |
| 5 | 10.5 (0.3) | 6.3 (3.6) | 4.9 (0.2) | 3.5 | 5.1 (0.4) | 4.5 (1.1) | 4.8 (1.1) | 4.7 (0.3) | 5.8 (0.1) | 4.9 (0.3) |
| 5A | 10.5 (0.4) | 6.5 (0.4) | 4.8 (1.4) | 6.9 (0.3) | 7.5 (2.9) | 5.5 (0.3) | 4.7 (1.2) | 4.6 (0.8) | 6.4 (0.3) | 5.2 (0.5) |
| 6 | 8.1 (0.9) | 4.6 (0.7) | 3.7 | 4.7 (1.4) | 3.5 | 4.9 (0.0) | 4.0 (1.0) | 4.4 (1.6) | 3.8 (1.8) | 4.5 (0.7) |
| 7 | 10.0 (0.3) | 4.6 (1.4) | bdl | 5.4 (1.6) | 5.2 (0.7) | bdl | 6.0 (0.1) | 4.8 (0.9) | 4.9 | 5.0 (0.5) |
| 8 | 10.3 (0.2) | 5.7 (0.3) | 5.1 (1.3) | 6.4 (0.2) | 5.7 (0.8) | 5.4 (0.2) | 4.9 (0.4) | 4.5 (0.6) | 5.5 (0.8) | 4.8 (0.1) |
| 9 | 10.5 (0.4) | 4.0 (0.7) | 5.8 (6.1) | 5.0 (0.3) | 4.5 (0.5) | 4.2 (0.8) | 5.4 (0.5) | 4.8 (0.6) | 5.0 (0.1) | 5.2 (0.3) |
All values are log-transformed and represent site-means (n = 5 samples/site). Ninety-five percent confidence intervals are noted in parentheses.