Skip to main content
. Author manuscript; available in PMC: 2013 Aug 14.
Published in final edited form as: J Chem Theory Comput. 2012 Jun 18;8(8):2741–2751. doi: 10.1021/ct300341d

Figure 4.

Figure 4

Correlation of reaction field energies by the geometric and algebraic methods for the 579 biomolecules in the Amber training set. Here the geometric and algebraic methods were used, respectively, to compute the intersection points of the molecular surface and finite-difference grid edges. The WHA method was used for the dielectric constant assignment on the molecular surface.