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. Author manuscript; available in PMC: 2013 Aug 14.
Published in final edited form as: J Chem Theory Comput. 2012 Jun 18;8(8):2741–2751. doi: 10.1021/ct300341d

Table 1.

Comparison of memory and timing usage between finite difference SES definitions with and without trimer arc dots. The tested molecule is 1tsr, which has 3010 atoms. The timings were obtained from an average of three runs. The memory amounts were obtained from allocation requests in the code.

With trimer arc dots Without trimer arc dots
Memory (MB) 611 1123
Timing (s) Arc dots calculations 0.76 0.63
Grid point labeling 1.60 1.84
Total 2.36 2.47