Table 1.
Description of datasets used in the study GEO identifiers indicate the GSE ID for the study
Source |
GEO |
GEO |
GEO |
GEO |
TCGA | TCGA | TCGA | TCGA | TCGA | TCGA |
---|---|---|---|---|---|---|---|---|---|---|
17648 | 21304 | 22867 | 26126 | |||||||
Tumor Type |
Colon |
Multiple Myeloma |
Glioblastoma |
Prostate |
Breast |
Kidney |
Lung AC |
Lung SCC |
Ovarian |
Stomach |
Normal Sample # |
22 |
3 |
4 |
71 |
27 |
199 |
24 |
27 |
8 |
57 |
Cancer Sample # |
22 |
161 |
77 |
71 |
67 |
199 |
24 |
27 |
39 |
57 |
P-value < 0.01 |
7922 |
4489 |
1403 |
9151 |
6672 |
10664 |
6419 |
6738 |
4376 |
8436 |
P-value < 0.01 and at least 10% change in average methylation |
5642 |
4343 |
1179 |
3263 |
3888 |
2022 |
3847 |
3641 |
1900 |
3000 |
Matched | Yes | No | No | Yes | No | Yes | Yes | Yes | No | Yes |