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. 2012 Aug 19;157(12):2335–2341. doi: 10.1007/s00705-012-1442-4

Table 1.

Comparison of recombination site positions in the full genome sequences of Siberian (10.RU.6637) and Uzbek (02.UZ.AY829214) HIV-1 isolates

Genome regiona 10.RU.6637 genome 02.UZ.AY829214 genome Homology of region to consensus sequencesb
Start of the region, position End of the region, position Recombination interval, positions Start of the region, position End of the region, position Recombination interval, positions
I 790 2208 2204–2209 798 2208 2204–2209 A
II 2209 3108 3098–3186 2209 3233 3199–3269 G
III 3109 4159 4140–4208 3234 4159 4140–4208 A
IV 4160 4451 4446–4509 4160 4861 4846–5526 G
V 4452 6013 5911–6042 4862 5991 5909–6033 A
VI 6014 6193 6194–6216 5992 6193 6194–6216 G
VII 6194 8260 8260–8338 6194 8260 8260–8371 A
VIII 8261 8730 8697–8741 8261 8733 8697–8746 G
IX 8731 9149 9127–9160 8734 9149 9092–9160 A
X 9150 9358 9343–9359 9150 9348 9349–9358 G

aAll positions are given according to HXB2 (GenBank accession no. K03455)

bA, HIV-1 subtype A and G, HIV-1 subtype G