Table 1.
Genome regiona | 10.RU.6637 genome | 02.UZ.AY829214 genome | Homology of region to consensus sequencesb | ||||
---|---|---|---|---|---|---|---|
Start of the region, position | End of the region, position | Recombination interval, positions | Start of the region, position | End of the region, position | Recombination interval, positions | ||
I | 790 | 2208 | 2204–2209 | 798 | 2208 | 2204–2209 | A |
II | 2209 | 3108 | 3098–3186 | 2209 | 3233 | 3199–3269 | G |
III | 3109 | 4159 | 4140–4208 | 3234 | 4159 | 4140–4208 | A |
IV | 4160 | 4451 | 4446–4509 | 4160 | 4861 | 4846–5526 | G |
V | 4452 | 6013 | 5911–6042 | 4862 | 5991 | 5909–6033 | A |
VI | 6014 | 6193 | 6194–6216 | 5992 | 6193 | 6194–6216 | G |
VII | 6194 | 8260 | 8260–8338 | 6194 | 8260 | 8260–8371 | A |
VIII | 8261 | 8730 | 8697–8741 | 8261 | 8733 | 8697–8746 | G |
IX | 8731 | 9149 | 9127–9160 | 8734 | 9149 | 9092–9160 | A |
X | 9150 | 9358 | 9343–9359 | 9150 | 9348 | 9349–9358 | G |
aAll positions are given according to HXB2 (GenBank accession no. K03455)
bA, HIV-1 subtype A and G, HIV-1 subtype G