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. 2012 Nov 20;3(6):e00473-12. doi: 10.1128/mBio.00473-12

TABLE 3 .

Percent identity between open reading frames of coronavirus HCoV-EMC/2012 and coronaviruses BtCoV-HKU4 and BtCoV-HKU5 at the nucleotide and amino acid levels

Annotation
in HCoV-EMC/2012
Annotation in
BtCoV-HKU4
and BtCoV-HKU5a
% identity
to BtCoV-HKU4b
% identity
to BtCoV-HKU5b
nt aa nt aa
ORF1ab ORF1ab 70.6 72.2 70.7 73.8
S S 66.3 66.1 63.8 63.5
ORF3 NS3a 46.4 34.9 46.0 31.4
ORF4a NS3b 51.5 37.5 47.8 38.0
ORF4b NS3c 35.1 23.5 45.2 25.9
ORF5 NS3d 56.6 46.9 58.1 54.2
E E 74.6 69.5 75.1 68.2
M M 72.8 82.6 73.0 82.2
N N 67.2 71.8 66.7 67.8
ORF8b Undescribed 45.3 32.1 48.0 33.8
a

Annotations used for HCoV-EMC/2012 differ from those used for BtCoV-HKU4 and BtCoV-HKU5 (10).

b

 Accession numbers used for BtCoV-HKU4 and BtCoV-HKU5 were EF065505 and EF065509.