Fig. 3.

(A) Top identified motif and motif occurrence histogram for hTra2 identified from RIP-seq data using ZTNBR with non-specific control (red) and using ZTNB with no control (blue). (B) The top six enriched motifs and their positional occurrence histograms from the HITS-CLIP Ago2/miR-124 data. All motifs match to the miR-124 reverse-complement. Seed highlighted in red. (C) Number of target sequences in Ago2/miR-124 with a match to any 7-mer from the reverse-complement miR-124 sequence. One nucleotide miss-match was allowed. Blue box: 164 sites (51.2%) contain a match within 90 nt of the peak centre