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. 2012 Nov 9;13(11):14623–14633. doi: 10.3390/ijms131114623

Table 1.

Comparison of Phylogenetic Information for Atractylodes Species from internal transcribed spacer (ITS), trnL-F, and combines data sets.

Parameter ITS trnL-F Combines
Number of accession 49 49 49
Range of sequence length (bp) 642–643 799–801 1442–1443
Characters of data matrix 643 800 1443
Number of constant sites (%) 584 (90.82%) 793 (99.13%) 1377 (96.09%)
Number of parsimony-information sites (%) 55 (8.55%) 7 (0.88%) 62 (4.32%)
Number of autopomorphic-information sites (%) 4 (0.62%) 0 (0.00%) 4 (0.28%)
Consistency index (CI) 0.892 0.969 0.891
Retention index (RI) 0.955 0.958 0.947
Rescaled consistency index (RC) 0.852 0.928 0.844
Homoplasy index (HI) 0.108 0.031 0.109