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. 2012 Nov 19;4(11):3209–3226. doi: 10.3390/v4113209

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© 2012 by the authors; licensee MDPI, Basel, Switzerland.

This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).

PMC Copyright notice

Gene and Protein Information in ViPR. The Gene/Protein Details page combines annotations at the gene and protein levels and presents them in a single comprehensive page in ViPR according to the source of the information. The information associated with the nucleocapsid protein from the SARS-CoV Tor2 strain is shown, including information such as UniProtKB and GenBank protein accession numbers, the corresponding protein sequence, genomic location, isoelectric point, molecular weight, Pfam (and other) domains, relevant 3D protein structures, predicted epitopes, experimentally-determined epitopes, Gene Ontology classification, results from BLASTp searches, and ortholog information, which are derived from UniProt, GenBank, InterProScan algorithm¬¬, PDB, NetCTL algorithm, Immune Epitope Database, Gene Ontology Consortium, BLAST, and the OrthoMCL algorithm, respectively.