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. 2012 Nov 29;7(11):e51005. doi: 10.1371/journal.pone.0051005

Table 1. Sequences of the primers and probes used in this study.

Name (Location1) Sequence (5′ to 3′)2 Orientation Length (bp)3
Tgfbr1-f1 (847 to 873) GAYAAYAARGAYAAYGGIACITGG Sense 359
Tgfbr1-r1 (1183 to 1205) GGIGCCATRTAICKYTTIGTICC Antisense
Tgfbr1-f2 (929 to 955) TCAACCGTACTGTGGTCAGCATCTCCG Sense 91
Tgfbr1-r2 (993 to 1019) CCAATGATCTCCATGTGGAGGTGGGCG Antisense
Tgfbr1-f3 (219 to 242) GATCTATATTCGAGTCCAAGAAGG Sense 1625
Tgfbr1-r3 (1821 to 1843) CATAAAGCTATTCATGTCTTCGG Antisense
Tgfbr1-f4 (1760 to 1784) GAGGTGTCAGACTGATTTTCAGGAG Sense 101
Tgfbr1-r4 (1836 to 1860) ATGTCACAAAGGAAATTCATAAAGC Antisense
Tgfbr1-Pb (1803 to 1827) TTGTAAGGAAGTTGGATACCGAACT Probe
Tgfbr1-f5 (335to 355) ATCAACACCTGAGACCGACCT Sense 168
Tgfbr1-r5 (480 to 502) GGCACTGATGGTAGGCAAAGAAC Antisense
Actin-f CAATCTACGAAGGTTATGCC Sense 186
Actin-r CCTGTTCAAAGTCAAGTGC Antisense
1

Location represents the position relative to the scallop Tgfbr1 translation start codon.

2

The bold and italics letter in the probe sequence indicates the position of the SNP.

3

The size of the amplicon.