Table 1. Result of MS/MS for Flag-LANA associated proteins (<1,000 aa).
| ID | Name | Size | MW (Da) | MS | Score | comment |
| CAA46472 | HNR hnRNP U protein | 806 | 88890.2 | 15 | 106 | TR |
| NP_031381 | HSP 90-beta | 724 | 83212.1 | 31 | 714 | HSP |
| NP_031381 | HSP 90-beta | 724 | 83212.1 | 19 | 190 | HSP |
| AAQ88940 | disulfide isomerase | 747 | 86071.9 | 19 | 332 | . |
| AAH68458 | Ezrin | 586 | 69198.6 | 28 | 252 | . |
| AAA52614 | HSPA5/GRP78 precursor | 653 | 72071.2 | 16 | 294 | HSP |
| AAH30634 | heat shock HSPA9 protein | 681 | 73808 | 29 | 1110 | HSP |
| NP_006588 | heat shock cognate 71 kDa | 724 | 70854.2 | 26 | 919 | HSP |
| BAG70196 | ATP-dependent RNA hel. | 614 | 69077.7 | 29 | 872 | . |
| AAS94255 | PIG48/chaperonin | 545 | 60540.3 | 18 | 188 | HSP |
| NP_004528 | nucleosome assembl. | 391 | 45345.9 | 10 | 219 | . |
| EAX09924 | chaperonin containing TCP1, | 547 | 59440.4 | 16 | 274 | HSP |
| CAG33456 | HSPC117 | 505 | 55227.9 | 17 | 329 | . |
| CAI41893 | tubulin, beta | 426 | 47736 | 22 | 944 | . |
| CAG33059 | HNRPH1 | 449 | 49099.3 | 16 | 482 | TR |
| NP_817126 | actin like protein 6A | 387 | 43208.4 | 11 | 223 | . |
| BAD97046 | IL enhancer binding factor 2 | 390 | 43021.2 | 15 | 379 | . |
| AAH08633 | actin, beta | 368 | 40978.4 | 20 | 945 | . |
| NP_919223 | HNR A3 | 378 | 39570.6 | 12 | 224 | TR |
| NP_112533 | HNRA2/B1 isoform B1 | 353 | 37406.7 | 30 | 929 | TR |
| NP_067676 | HNR H3 isoform b | 331 | 35216.4 | 19 | 391 | TR |
| NP_002128 | HNR A2/B1 isoform A2 | 341 | 35983.9 | 31 | 1260 | TR |
| NP_002127 | HNR A1 isoform a | 320 | 34175.2 | 17 | 664 | TR |
| CAA27638 | Protein G | 480 | 51837.5 | 7 | 299 | . |
| NP_057123 | homeobox prox 1 | 244 | 28050.7 | 18 | 294 | . |
| AAC37629 | IgG | 113 | 12356.2 | 7 | 204 | . |