Table S2.
Lists of gene families in C. neoformans used for parameter optimization of BLASTCLUST.
| Family | No of Genes | Gene ID |
|---|---|---|
| 1 | 9 | CNAG_00792T0, CNAG_00823T0, CNAG_01575T0, CNAG_02262T0, CNAG_02430T0, CNAG_02977T0, CNAG_03450T0, CNAG_03503T0, CNAG_07781T0 |
| 2 | 7 | CNAG_02883T0, CNAG_03130T0, CNAG_03315T0, CNAG_05348T0, CNAG_05968T0, CNAG_05998T0, CNAG_06606T0 |
| 3 | 6 | CNAG_00099T0, CNAG_03341T0, CNAG_03962T0, CNAG_04052T0, CNAG_05825T0, CNAG_06182T0 |
| 4 | 6 | CNAG_00550T0, CNAG_00770T0, CNAG_01642T0, CNAG_01916T0, CNAG_02682T0, CNAG_05201T0 |
| 5 | 6 | CNAG_00859T0, CNAG_02018T0, CNAG_06944T0, CNAG_07002T0, CNAG_07753T0, CNAG_07893T0 |
| 6 | 6 | CNAG_01495T0, CNAG_05320T0, CNAG_05321T0, CNAG_05329T0, CNAG_06530T0, CNAG_07626T0 |
| 7 | 5 | CNAG_00308T0, CNAG_03420T0, CNAG_03960T0, CNAG_04141T0, CNAG_04988T0 |
| 8 | 5 | CNAG_01500T0, CNAG_01714T0, CNAG_03389T0, CNAG_06249T0, CNAG_06876T0 |
| 9 | 5 | CNAG_04474T0, CNAG_06536T0, CNAG_06537T0, CNAG_06538T0, CNAG_06539T0 |
| 10 | 5 | CNAG_05369T0, CNAG_06931T0, CNAG_06936T0, CNAG_06985T0, CNAG_07707T0 |
| 11 | 4 | CNAG_00122T0, CNAG_01940T0, CNAG_02189T0, CNAG_05264T0 |
| 12 | 4 | CNAG_00575T0, CNAG_04981T0, CNAG_05015T0, CNAG_05256T0 |
| 13 | 4 | CNAG_00789T0, CNAG_00980T0, CNAG_03477T0, CNAG_05911T0 |
| 14 | 4 | CNAG_00862T0, CNAG_05319T0, CNAG_05376T0, CNAG_05383T0 |
| 15 | 4 | CNAG_00863T0, CNAG_02475T0, CNAG_04561T0, CNAG_07389T0 |
| 16 | 4 | CNAG_01373T0, CNAG_01740T0, CNAG_02196T0, CNAG_05925T0 |
| 17 | 4 | CNAG_01968T0, CNAG_03797T0, CNAG_07447T0, CNAG_07613T0 |
| 18 | 4 | CNAG_01840T0, CNAG_03787T0, CNAG_04948T0, CNAG_06914T0 |
| 19 | 4 | CNAG_02217T0, CNAG_03326T0, CNAG_06487T0, CNAG_07499T0 |
| 20 | 4 | CNAG_05276T0, CNAG_01699T0, CNAG_05690T0, CNAG_05563T0 |
| 21 | 3 | CNAG_00063T0, CNAG_04828T0, CNAG_06745T0 |
| 22 | 3 | CNAG_00919T0, CNAG_01040T0, CNAG_02966T0 |
| 23 | 3 | CNAG_01635T0, CNAG_02016T0, CNAG_04225T0 |
| 24 | 3 | CNAG_01681T0, CNAG_04276T0, CNAG_04982T0 |
| 25 | 3 | CNAG_02552T0, CNAG_06172T0, CNAG_07445T0 |
| 26 | 3 | CNAG_02958T0, CNAG_06241T0, CNAG_07865T0 |
| 27 | 3 | CNAG_03277T0, CNAG_05316T0, CNAG_06623T0 |
| 28 | 3 | CNAG_04326T0, CNAG_06374T0, CNAG_06638T0 |
| 29 | 3 | CNAG_05937T0, CNAG_05941T0, CNAG_07703T0 |
| 30 | 3 | CNAG_06297T0, CNAG_06298T0, CNAG_06388T0 |
| 31 | 2 | CNAG_01487T0, CNAG_01511T0 |
| 32 | 2 | CNAG_00005T0, CNAG_02012T0 |
| 33 | 2 | CNAG_02086T0, CNAG_02087T0 |
| 34 | 2 | CNAG_02241T0, CNAG_05453T0 |
| 35 | 2 | CNAG_02899T0, CNAG_03007T0 |
| 36 | 2 | CNAG_02896T0, CNAG_03311T0 |
| 37 | 2 | CNAG_03355T0, CNAG_05590T0 |
| 38 | 2 | CNAG_05450T0, CNAG_05454T0 |
| 39 | 2 | CNAG_06010T0, CNAG_06018T0 |
| 40 | 2 | CNAG_06524T0, CNAG_06821T0 |
| 41 | 1 | CNAG_01563T0 |
| 42 | 1 | CNAG_03763T0 |
| 43 | 1 | CNAG_04049T0 |
| 44 | 1 | CNAG_04610T0 |
| 45 | 1 | CNAG_05721T0 |
| 46 | 1 | CNAG_06603T0 |
| 47 | 1 | CNAG_06620T0 |
| 48 | 1 | CNAG_06828T0 |
| 49 | 1 | CNAG_07687T0 |
| 50 | 1 | CNAG_07766T0 |