Table 2.
Pan genomes of differentUreaplasmaspecies sets
| All 19 strains | 14 ATCC serovars | U. urealyticum (14 strainsa) | U. parvum (5 strainsb) | |
|---|---|---|---|---|
| Pan genome |
1020 |
971 |
938 |
688 |
| Core genome |
515 |
523 |
553 |
538 |
| Singletons |
262 |
246 |
216 |
77 |
| Clusters of Orthologous Genes(COGs) | 758 | 725 | 722 | 688 |
Pan genome represents the number of clusters of orthologous genes and singletons. Singletons are genes found only in one of the genomes. Clusters of Orthologous Genes (COGs) have genes orthologous among at least 2 genomes.
a) ATCC UUR2, UUR4, UUR5, UUR7-13, and the clinical isolates 2033, 2608, 4155, 4318.
b) ATCC UPA1, UPA3 (ATCC 27815), UPA3 (ATCC 700970), UPA6, UPA14.