Table 2.
Identification of obligate anaerobic isolates by 16 S rRNA gene sequence analysis
| Sample | Isolate | Closest BLAST hit | Percent similarity | Gene bank accession numbers |
|---|---|---|---|---|
| S2 |
SLPYG 1 |
Bifidobacteria adolescentis |
97% |
JN389522 |
| (8 months) |
SLPYG 2 |
Parabacteroides distasonis |
99% |
JN038555 |
| |
SLPYG 3 |
Parabacteroides distasonis |
99% |
JN038556 |
| |
SLBE 4 |
Parabacteroides distasonis |
99% |
JN038557 |
| |
SLBE 5 |
Parabacteroides distasonis |
99% |
JN038558 |
| S1 |
VLPYG 2 |
Clostridium subterminale |
99% |
JN093125 |
| (26 years) |
VLPYG 3 |
Bacteroides vulgates |
99% |
JN084207 |
| |
VLPYG 4 |
Parabacteroides distasonis |
99% |
JN038554 |
| |
VLPYG 5 |
Clostridium difficile |
96% |
JN093126 |
| |
VLPYG 6 |
Clostridium mangenotii |
98% |
JN093127 |
| |
VLBE 7 |
Bacteroides fragilis |
99% |
JN084198 |
| |
VLBE 8 |
Bacteroides thetaiotaomicron |
99% |
JN084201 |
| |
VLBE 9 |
Bacteroides thetaiotaomicron |
99% |
JN084202 |
| S3 |
BLBE 1 |
Parabacteroides distasonis |
97% |
JN038559 |
| (56 years) |
BLBE 2 |
Bacteroides ovatus |
98% |
JN084211 |
| |
BLPYG 5 |
Bacteroides uniformis |
99% |
JN084205 |
| |
BLBE 6 |
Bacteroides xylanisolvens |
99% |
JN084212 |
| |
BLPYG 7 |
Megasphaera elsdenii |
97% |
HM990964 |
| |
BLPYG 8 |
Clostridium subterminale |
96% |
JN093128 |
| |
BLPYG 9 |
Bacteroides fragilis |
97% |
JN084199 |
| |
BLBE 11 |
Parabacteroides distasonis |
99% |
JN038560 |
| BLBE 12 | Parabacteroides distasonis | 99% | JN038561 |