Table 2.
Experimental and calculated pKa’s of a series of dicarboxylic acids.
Acid | Expt.1 | E+CL2 | GB3 | E−CL4 | |
---|---|---|---|---|---|
n5 | pK1 | ||||
Azelaic | 7 | 4.55 | 4.4 | 4.20 | 4.2 |
Suberic | 6 | 4.52 | 4.6 | 4.19 | 4.3 |
Pimelic | 5 | 4.48 | 4.5 | 4.17 | 4.2 |
Adipic | 4 | 4.42 | 4.7 | 4.04 | 4.1 |
Glutaric | 3 | 4.34 | 4.0 | 3.57 | 3.7 |
AAE | 0.18 | 0.43 | 0.38 | ||
pK2 | |||||
Azelaic | 7 | 5.41 | 5.3 | 5.18 | 7.1 |
Suberic | 6 | 5.40 | 5.2 | 5.25 | 7.1 |
Pimelic | 5 | 5.42 | 5.3 | 5.25 | 7.0 |
Adipic | 4 | 5.41 | 5.4 | 5.42 | 7.1 |
Glutaric | 3 | 5.42 | 5.0 | 5.05 | 6.6 |
AAE | 0.18 | 0.19 | 1.55 | ||
ΔpKa6 | |||||
Azelaic | 7 | 0.86 | 0.8 | 0.98 | 2.9 |
Suberic | 6 | 0.88 | 0.6 | 1.06 | 2.8 |
Pimelic | 5 | 0.94 | 0.8 | 1.08 | 2.8 |
Adipic | 4 | 0.99 | 0.7 | 1.38 | 2.9 |
Glutaric | 3 | 1.08 | 1.0 | 1.48 | 2.9 |
AAE | 0.19 | 0.24 | 1.9 |
Experimental data are taken from Ref. 34.
E+CL refers to the simulations based on explicit solvent with charge leveling.
GB refers to the simulations based on the GB implicit-solvent model.
E−CL refers to the simulations based on explicit solvent without charge leveling.
n refers to the number of methylene groups in the dicarboxylic acid HO2C–(CH2)n–CO2H.
In all simulations, the microscopic pK1a of azelaic acid (4.85) was used as the model pKa (see Sec. 3).