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. 2012 Nov 30;7(11):e51063. doi: 10.1371/journal.pone.0051063

Table 1. Bacterial strains and plasmids used in this study.

Relevant characteristicsa Reference or source
X. campestris pv. vesicatoria
85-10 Pepper-race 2; wild type; Rifr [51], [73]
85-10ΔhrcQ hrcQ deletion mutant of strain 85-10 This study
85-10ΔhrcQ::hrcQ Derivative of strain 85-10ΔhrcQ carrying hrcQ-c-myc under control of the native promoter inserted into the hpaFG region This study
85* 85-10 derivative containing the hrpG* mutation [34]
85*ΔhrcQ hrcQ deletion mutant of strain 85* This study
85*ΔhrcQ::hrcQ Derivative of strain 85*ΔhrcQ carrying hrcQ-c-myc under control of the native promoter inserted into the hpaFG region This study
E. coli
BL21 (DE3) F- ompT hsdSB (rB - mB -) gal dcm (DE3) Stratagene, Heidelberg, Germany
Top10 F- mcrA Δ(mrr-hsdRMS-mcrBC) Φ80lacZΔM15 ΔlacX74 recA1 araD139 Δ(araleu) 7697 galU galK rpsL (StrR) endA1 nupG Invitrogen, Karlsruhe, Germany
DH5α F- recA hsdR17(rk-,mk+) Φ80dlacZ ΔM15 Bethesda Research Laboratories, Bethesda, Md.
DH5α λpir F- recA hsdR17(rk-,mk+) Φ80dlacZ ΔM15pir [74]
Plasmids
pBlueskript(II) KS Phagemid, pUC derivative; Apr Stratagene
pBRM Golden Gate-compatible derivative of pBBR1MCS-5 for lacpromoter-driven gene expression; contains a 3× c-Mycepitope-encoding sequence [75]
pBRM-P Derivative of pBRM without lac promoter This study
pBRMhrcN pBRM derivative encoding HrcN-c-Myc [75]
pBRMhrcQ pBRM derivative encoding HrcQ-c-Myc This study
pBRMhrcQStop pBRM derivative encoding HrcQ This study
pBRM-PhrcQ pBRM-P derivative containing hrcQ-c-myc and 299 bp upstream region This study
pBRM-PhrcQStop pBRM-P derivative containing hrcQ and 299 bp upstream region This study
pBRMhrcV pBRM derivative encoding HrcV-c-Myc N. Hartmann and D. Büttner, unpublished
pBRMhrcV324-645 pBRM derivative encoding HrcV324-645-c-Myc N. Hartmann and D. Büttner, unpublished
pBRMxopJ pBRM derivative encoding XopJ-c-Myc [26]
pDGW4MhpaA Derivative of pDGW4M encoding HpaA-c-Myc [80]
pDMhrcL Derivative of pDSK602 encoding HrcL-c-Myc [20]
pGEX-2TKM GST expression vector; ptac GST lacI q pBR322 ori; Apr, derivative ofpGEX-2TK with polylinker of pDSK604 Stratagene[38]
pGhpaA pGEX-2TKM derivative encoding GST-HpaA [76]
pGhpaB pGEX-2TKM derivative encoding GST-HpaB [18]
pGhpaC pGEX-2TKM derivative encoding GST-HpaC [18]
pGhrpB2 pGEX-2TKM derivative encoding GST-HrpB2 [62]
pGhrpE pGEX-2TKM derivative encoding GST-HrpE [55]
pGhrcL pGEX-2TKM derivative encoding GST-HrcL [20]
pGhrcN pGEX-2TKM derivative encoding GST-HrcN [76]
pGhrcQ pGEX-2TKM derivative encoding GST-HrcQ This study
pGhrcU pGEX-2TKM derivative encoding GST-HrcU [21]
pGhrcU255-357 pGEX-2TKM derivative encoding GST-HrcU255-357 [21]
pGxopA pGEX-2TKM derivative encoding GST-XopA [17]
pGxopJ pGEX-2TKM derivative encoding GST-XopJ This study
pGxopF1 pGEX-2TKM derivative encoding GST-XopF1 [18]
pG300 pGEX-2TKM derivative encoding GST-AvrBs3 [77]
pG356F pGEX-2TKM derivative encoding GST-AvrBs3Δ2 which lacks theN-terminal 152 amino acids [17]
pGavrBs350 pGEX-2TKM derivative encoding GST-AvrBs31-50 [17]
pLAND-P Derivative of pOK1 carrying fragments of the hpaFG region flanking lacZ, the lac promoter and a triple c-Myc epitope-encoding sequence This study
pLAND-PhrcQ Derivative of pLAND-P carrying hrcQ and 299 bp upstream region This study
pOK1 Suicide vector; sacB sacQ mobRK2 oriR6K; Smr [78]
pOKΔhrcQ Derivative of pOK1 carrying the flanking regions of hrcQ This study
pRK2013 ColE1 replicon, TraRK+ Mob+; Kmr [49]
pUC119 ColE1 replicon; Apr [79]
a

Ap, ampicillin; Km, kanamycin; Rif, rifampicin; Sm, spectinomycin; Gm, gentamycin; r, resistant.