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. 2012 Sep 14;10:27. doi: 10.1186/1478-811X-10-27

Table 3.

Specificities obtained using Physiological Ligands

SH2 Domain Specificity
ABL1
[pY] [D/E/S] [D/E] [P/N/D/E]
ABL2
[pY] [V] [N/Q]
BLK
[pY] [D/E/ϕ] [D/E/L] [P/I]
BRK
[pY] [D/E] [X] [D/E/ϕ]
CRK
[D] [X] [pY] [D] [V/L] [P] [P]
CRKL
[D] [X] [pY] [D] [ϕ] [P] [P/R]
DAPP1
[pY] [X] [X] [D/E/ϕ] [E]
FER
[D/E] [D/E] [pY] [D/G] [D/E] [ϕ]
FGR
[E] [P/D/E] [X] [pY] [D/E/G] [X] [D/E/ϕ] [Y]
FYN
[pY] [X] [D/ϕ] [ϕ]
GADS
[pY] [V] [N]
GRAP
[pY] [V/E] [N]
GRB2
[pY] [V/E] [N]
GRB7
[pY] [E] [N/Y]
HCK
[D/E] [D/P] [X] [pY] [D/E/G] [D/E/ϕ] [P/I/L]
ITK
[pY] [ϕ] [X] [D/ϕ]
LCK
[pY] [D/E/G] [D/E] [P/L] [P]
LYN
[pY] [D/E/G] [D/E] [P] [P]
MIST
[pY] [ϕ] [ζ] [ϕ] [D/E] [ϕ]
NCK1
[pY] [D/E] [E/L] [P/V]
PI3K1_N
[pY] [V/D] [X] [I/M/V]
PI3K1_C
[pY] [V/M/E] [N/T/M] [M]
PLCG1_C
[pY] [ϕ] [X] [D/E]
PTPN11_N
[pY] [ϕ] [X] [ϕ] [D/E] [ϕ]
RASA1_N
[pY] [ϕ] [X] [D/ϕ]
RASA1_C
[pY] [X] [X] [D/E/ϕ]
SH2B
[pY] [X] [X] [D/E/ϕ]
SH2D1B
[pY] [X] [X] [ϕ]
SH2D2A
[pY] [E] [N/T] [D/ϕ]
SH3BP2
[pY] [D/E] [N] [V]
SHB
[pY] [ϕ] [X] [ϕ] [D/E] [ϕ]
SHD
[pY] [ϕ] [X] [ϕ] [D/E] [ϕ]
SHE
[pY] [ϕ] [X] [ϕ] [D/E] [ϕ]
SHF
[pY] [ϕ] [X] [ϕ] [D/E] [ϕ]
SHC1
[pY] [D/E/G] [D/E/ϕ] [ϕ]
SLNK
[pY] [G/D/V] [D/T] [D/ϕ]
SRC
[D/E] [X] [X] [pY] [D] [D/E/ϕ] [P/I]
SYK_C
[ϕ] [pY] [V] [X] [D/E/ϕ] [D/E]
TENC1
[pY] [E]
VAV1
[pY] [V/E/L] [X] [P]
YES
[pY] [D/E/G] [D/E/ϕ] [ϕ]
ZAP70_N [P] [X] [pY] [X] [X] [ψ/ϕ]

The general specificity information is obtained from the arrays is expressed in a regular expression form. Amino acid residues are indicated by their single-letter codes. Groups of amino acids are noted as φ = hydrophobic residues (Val, Ile, Leu, Phe, Trp, Tyr, Met); ψ = aliphatic residues (Val, Ile, Leu, Met); ζ = polar residues (Asn, Gln, Ser, Thr, Glu, Asp, Lys, Arg, His).