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. Author manuscript; available in PMC: 2012 Dec 5.
Published in final edited form as: Biochemistry. 2006 Jan 24;45(3):871–879. doi: 10.1021/bi0512703

Table 2.

Thermodynamic and affinity changes for Cdc13-DBD binding to Tel-11 containing single substitutions.

Sample Sequence Average ΔΔG
(kcal/mol)
Average
relative Kd
WT GTGTGGGTGTG 0 1
A1 ATGTGGGTGTG 2.9 ± 0.1 200
C1 CTGTGGGTGTG 3.3 ± 0.1 370
T1 TTGTGGGTGTG 2.8 ± 0.1 170
S1 STGTGGGTGTG 2.8 ± 0.2 160
I1 ITGTGGGTGTG 0.7 ± 0.1 3.8
A3 GTATGGGTGTG 3.3 ± 0.1 410
C3 GTCTGGGTGTG 4.3 ± 0.1 >2300
T3 GTTTGGGTGTG 3.5 ± 0.4 >540
S3 GTSTGGGTGTG 3.2 ± 0.4 340
I3 GTITGGGTGTG 0.2 ± 0.1 1.4
A4 GTGAGGGTGTG 3.9 ± 0.1 >1100
C4 GTGCGGGTGTG 3.7 ± 0.1 >830
G4 GTGGGGGTGTG 2.8 ± 0.1 170
U4 GTGUGGGTGTG 0.4 ± 0.1 2.2