Table 1.
Genotypes | Illumina GA IIx reads | Total number of SNPs | Number of unique genes with identified SNPs |
---|---|---|---|
ICPL 87119 | 7 182 619 | 7488 | 3116 |
ICPL 87091 | 8 977 567 | ||
BSMR 736 | 11 065 219 | 2115 | 1454 |
TAT 10 | 7 932 691 | ||
ICP 7035 | 1 3 223 516 | 1256 | 983 |
TTB 7 | 4 122 216 | ||
ICPL 332 | 16 361 115 | 2452 | 1819 |
ICPL 20096 | 9 507 797 | ||
ICPB 2049 | 11 494 670 | 1892 | 1435 |
ICPL 99050 | 13 498 156 | ||
ICP 28 | 9 721 562 | 1910 | 1352 |
ICPW 94 | 15 828 791 | ||
Total | 128 915 919 | 17 113 | 10 159 |
TOGs | |||
ICP 28 | 752 | 670 | |
ICPW 94a |
aICPW 94 is an accession of C. scarabaeoides, a wild relative of pigeonpea (C. cajan).