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. 2012 Dec 5;7(12):e50969. doi: 10.1371/journal.pone.0050969

Figure 2. Beta-diversity of bacterial communities present in leaves of S. purpurea from NY and FL sampling locations using the Unifrac metric.

Figure 2

Bacterial community structure was assessed by sequencing 16S rRNA genes as described in the text. A phylogenetic tree was generated by inserting partial gene sequences recovered in this study into a tree based on near-full length sequences, implemented within the software package ARB. The phylogenetic tree was analyzed using the software package Unifrac, and a pair-wise distance matrix was generated for comparison of the bacterial community in each leaf. This matrix was used to generate a MDS plot, demonstrating distinct bacterial communities in FL and NY leaves.