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. 2012 Dec 5;7(12):e50261. doi: 10.1371/journal.pone.0050261

Table 3. Functional categorization of target genes on the basis of AmiGO description.

Accession number Protein description miR-ID
Carbohydrate/lipid metabolisms/Energy metabolism
LOC_Os05g42110.1 Allyl alcohol dehydrogenase, putative expressed miR168
LOC_Os08g04460.1,.2 NADPH dependent FMN reductase domain miR168
LOC_Os08g04310.1, Plastocyanin like domain containing protein, putative miR528
LOC_0s12g16350.1 Enoyl-CoA hydratase/isomerase, putative miR821
LOC_Os08g36910.1,2,3 Alfa –amylase precursor, putative miR1423
LOC_Os02g18870.1 GDSL-like lipase/acyl hydrolase, putative miR1846
LOC_Os010g33960.1,2 START-domain containing protein miR166
Nitrogen metabolism, amino acid metabolism and protein/peptide degradation
LOC_Os06g05760.1 Ubiquitin family protein, putative miR164
LOC_Os03g48180.1,2 PTR2,Peptide transporter, putative miR168
LOC_Os12g42400.2, Ribosomal family, protein miR169
LOC_Os01g44330.1 Laccase precursor, putative miR528
LOC_Os03g574040.1,2 Clathrin adaptor complex small chain domain miR156
Secondary metabolism
LOC_Os06g03830.1,2 Retinol dehydrogenase, putative miR167
LOC_Os02g21520.1 Chalcone isomerase, putative miR168
LOC_Os11g13650.1 Cellulose synthase, putative miR820
LOC_Os04g35590.1 Thioesterase family protein, putative miR1318
Stress enzymes/Cell rescue, defense and virulence
LOC_Os07g29820.1 NBS-LRR disease resistance protein, putative miR167
LOC_Os10g17790.1 Remorin C terminal domain containing, putative miR168
LOC_Os08g44770.1,2 Cu/Zn SOD, putative miR528
LOC_Os01g03620.1 Multi copper oxidase, putative miR528
LOC_Os02g01680.1 Macrophage migration inhibition protein, putative miR2123
LOC_Os04g57200.2 Heavy metal transport and detoxification, protein miR164
LOC_Os06g06050.1 OsFBL27 F-Box LRR miR528
LOC_Os06g37150.1 L-ascorbate oxidase precursor, putative miR528
Kinases/receptors/signaling molecule/transporters
LOC_Os04g41540.1 OsCML22 Calmodulin related calcium sensor protein miR164
LOC_Os02g43430.1 Kinase domain miR156
LOC_Os01g63290.2 Transporter major facilitator family, putative miR167
LOC_Os11g44860.1 Cysteine rich receptor like kinase, putative miR168
LOC_Os03g59770.1,2 EF Hand, putative miR1318
LOC_Os04g51610.1 Ca transporting ATPase, putative miR1318
LOC_Os01g45830.1 Sulphate transporter, putative miR2123
Organ development
LOC_Os11g30370.1 OsSPL-SBP box gene family member miR156
LOC_Os02g58490.1 PINHEAD protein miR168
LOC_Os03g07880.1,2,3 Nuclear transcription factor Y subunit, putative miR169
LOC_Os06g23650.1 NAM domain containing proteins, putative miR164
LOC_11g03310. NAM domain containing proteins, putative miR820
Structural proteins
LOC_Os09g33800.1 Arabinogalactan putative, expressed miR528
LOC_Os04g47580.1 Cyclin putative, expressed miR535
LOC_Os02g38340.1 Actin putative, expressed miR821