Table 1.
Target sequence |
Sense and antisense oligonucleotide primers used | |
---|---|---|
I. For cDNA cloning*: | ||
COMT | Sense: | 5’ -CGCGGATCCATGCTGTGGGTTGTGTTGGCAGTGGTGGTG-3’ |
(Full-length) | Antisense: | 5’ -CGCGGATCCTCATCCTAAGAAGACCGATTTCTCCAGGCC-3’ |
COMT | Sense: | 5’ -CGCGGATCCCACGATGTGGTCCATCAGCGGCTCCTGAAC-3’ |
(Truncated) | Antisense: | 5’ -CGCGGATCCTCATCCTAAGAAGACCGATTTCTCCAGGCC-3’ |
II. For real-time RT-PCR analysis**: | ||
COMT | Sense: | 5’ -TCACGACCACAGCGCATCT-3’ |
Antisense: | 5’ -CCCACATTCATGGCCCATT-3’ | |
β-Actin | Sense: | 5’ -CGAGCTGTCTTCCCATCCA-3’ |
Antisense: | 5’ -TCACCAACGTAGCTGTCTTTCTG-3’ |
Recognition sites of BamHI restriction endonuclease in the oligonucleotides are underlined. Initiation and termination codons for translation are in bold type.
The sense and antisense oligonucleotide primer sets listed were verified by BLAST Search to be specific for the zebrafish COMT or β-actin nucleotide sequence.