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. Author manuscript; available in PMC: 2012 Dec 6.
Published in final edited form as: Aquat Toxicol. 2010 Dec 29;102(1-2):18–23. doi: 10.1016/j.aquatox.2010.12.016

Table 1.

Oligonucleotide primers used for the cDNA cloning of zebrafish COMT and for the quantitative real-time RT-PCR analysis of the developmental stage-dependent expression of the zebrafish COMT

Target
sequence
Sense and antisense oligonucleotide primers used
I. For cDNA cloning*:
COMT Sense: 5’ -CGCGGATCCATGCTGTGGGTTGTGTTGGCAGTGGTGGTG-3’
(Full-length) Antisense: 5’ -CGCGGATCCTCATCCTAAGAAGACCGATTTCTCCAGGCC-3’
COMT Sense: 5’ -CGCGGATCCCACGATGTGGTCCATCAGCGGCTCCTGAAC-3’
(Truncated) Antisense: 5’ -CGCGGATCCTCATCCTAAGAAGACCGATTTCTCCAGGCC-3’
II. For real-time RT-PCR analysis**:
COMT Sense: 5’ -TCACGACCACAGCGCATCT-3’
Antisense: 5’ -CCCACATTCATGGCCCATT-3’
β-Actin Sense: 5’ -CGAGCTGTCTTCCCATCCA-3’
Antisense: 5’ -TCACCAACGTAGCTGTCTTTCTG-3’
*

Recognition sites of BamHI restriction endonuclease in the oligonucleotides are underlined. Initiation and termination codons for translation are in bold type.

**

The sense and antisense oligonucleotide primer sets listed were verified by BLAST Search to be specific for the zebrafish COMT or β-actin nucleotide sequence.